Protein–RNA interactions for Protein: Q9Z1G4

Atp6v0a1, V-type proton ATPase 116 kDa subunit a isoform 1, mousemouse

Known RBP Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v0a1Q9Z1G4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Atp6v0a1Q9Z1G4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Atp6v0a1Q9Z1G4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Atp6v0a1Q9Z1G4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Atp6v0a1Q9Z1G4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Atp6v0a1Q9Z1G4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.22■■■□□ 2.11
Atp6v0a1Q9Z1G4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Atp6v0a1Q9Z1G4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Atp6v0a1Q9Z1G4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Atp6v0a1Q9Z1G4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
Atp6v0a1Q9Z1G4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Atp6v0a1Q9Z1G4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Atp6v0a1Q9Z1G4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Atp6v0a1Q9Z1G4 Peli2-204ENSMUST00000226513 1320 ntBASIC28.17■■■□□ 2.1
Atp6v0a1Q9Z1G4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Atp6v0a1Q9Z1G4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.15■■■□□ 2.1
Atp6v0a1Q9Z1G4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Atp6v0a1Q9Z1G4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.13■■■□□ 2.09
Atp6v0a1Q9Z1G4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Atp6v0a1Q9Z1G4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Atp6v0a1Q9Z1G4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Atp6v0a1Q9Z1G4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Atp6v0a1Q9Z1G4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Atp6v0a1Q9Z1G4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
Atp6v0a1Q9Z1G4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Atp6v0a1Q9Z1G4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Atp6v0a1Q9Z1G4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Atp6v0a1Q9Z1G4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.01■■■□□ 2.07
Atp6v0a1Q9Z1G4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Atp6v0a1Q9Z1G4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Atp6v0a1Q9Z1G4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Atp6v0a1Q9Z1G4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Atp6v0a1Q9Z1G4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Atp6v0a1Q9Z1G4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Atp6v0a1Q9Z1G4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Atp6v0a1Q9Z1G4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Atp6v0a1Q9Z1G4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Atp6v0a1Q9Z1G4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Atp6v0a1Q9Z1G4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Atp6v0a1Q9Z1G4 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.91■■■□□ 2.06
Atp6v0a1Q9Z1G4 Gm16148-201ENSMUST00000119653 893 ntBASIC27.91■■■□□ 2.06
Atp6v0a1Q9Z1G4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
Atp6v0a1Q9Z1G4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Atp6v0a1Q9Z1G4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Atp6v0a1Q9Z1G4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Atp6v0a1Q9Z1G4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Atp6v0a1Q9Z1G4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Atp6v0a1Q9Z1G4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Atp6v0a1Q9Z1G4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Atp6v0a1Q9Z1G4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Atp6v0a1Q9Z1G4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.76■■■□□ 2.04
Atp6v0a1Q9Z1G4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Atp6v0a1Q9Z1G4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Atp6v0a1Q9Z1G4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Atp6v0a1Q9Z1G4 Zfp131-205ENSMUST00000223812 663 ntBASIC27.75■■■□□ 2.03
Atp6v0a1Q9Z1G4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Atp6v0a1Q9Z1G4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.73■■■□□ 2.03
Atp6v0a1Q9Z1G4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Atp6v0a1Q9Z1G4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Atp6v0a1Q9Z1G4 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.7■■■□□ 2.02
Atp6v0a1Q9Z1G4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Atp6v0a1Q9Z1G4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Atp6v0a1Q9Z1G4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Atp6v0a1Q9Z1G4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.65■■■□□ 2.02
Atp6v0a1Q9Z1G4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Atp6v0a1Q9Z1G4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Atp6v0a1Q9Z1G4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Atp6v0a1Q9Z1G4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Atp6v0a1Q9Z1G4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.61■■■□□ 2.01
Atp6v0a1Q9Z1G4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.6■■■□□ 2.01
Atp6v0a1Q9Z1G4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.59■■■□□ 2.01
Atp6v0a1Q9Z1G4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
Atp6v0a1Q9Z1G4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
Atp6v0a1Q9Z1G4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Atp6v0a1Q9Z1G4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Atp6v0a1Q9Z1G4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.57■■■□□ 2
Atp6v0a1Q9Z1G4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
Atp6v0a1Q9Z1G4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Atp6v0a1Q9Z1G4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.55■■■□□ 2
Atp6v0a1Q9Z1G4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Atp6v0a1Q9Z1G4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Atp6v0a1Q9Z1G4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
Atp6v0a1Q9Z1G4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.53■■■□□ 2
Atp6v0a1Q9Z1G4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.53■■■□□ 2
Atp6v0a1Q9Z1G4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.53■■■□□ 2
Atp6v0a1Q9Z1G4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.52■■■□□ 2
Atp6v0a1Q9Z1G4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.51■■□□□ 1.99
Atp6v0a1Q9Z1G4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
Atp6v0a1Q9Z1G4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Atp6v0a1Q9Z1G4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Atp6v0a1Q9Z1G4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Atp6v0a1Q9Z1G4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Atp6v0a1Q9Z1G4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Atp6v0a1Q9Z1G4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Atp6v0a1Q9Z1G4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Atp6v0a1Q9Z1G4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Atp6v0a1Q9Z1G4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Atp6v0a1Q9Z1G4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Atp6v0a1Q9Z1G4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Atp6v0a1Q9Z1G4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms