Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.87■□□□□ 0.93
Pfdn5Q9WU28 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.87■□□□□ 0.93
Pfdn5Q9WU28 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.87■□□□□ 0.93
Pfdn5Q9WU28 Gm25238-201ENSMUST00000174914 89 ntBASIC20.86■□□□□ 0.93
Pfdn5Q9WU28 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pfdn5Q9WU28 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pfdn5Q9WU28 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pfdn5Q9WU28 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pfdn5Q9WU28 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pfdn5Q9WU28 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pfdn5Q9WU28 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.81■□□□□ 0.92
Pfdn5Q9WU28 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pfdn5Q9WU28 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn5Q9WU28 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn5Q9WU28 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn5Q9WU28 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn5Q9WU28 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn5Q9WU28 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn5Q9WU28 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn5Q9WU28 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn5Q9WU28 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pfdn5Q9WU28 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn5Q9WU28 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn5Q9WU28 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn5Q9WU28 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pfdn5Q9WU28 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn5Q9WU28 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.74■□□□□ 0.91
Pfdn5Q9WU28 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn5Q9WU28 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pfdn5Q9WU28 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Pfdn5Q9WU28 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pfdn5Q9WU28 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Pfdn5Q9WU28 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn5Q9WU28 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Pfdn5Q9WU28 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pfdn5Q9WU28 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn5Q9WU28 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.67■□□□□ 0.9
Pfdn5Q9WU28 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pfdn5Q9WU28 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pfdn5Q9WU28 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pfdn5Q9WU28 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.64■□□□□ 0.89
Pfdn5Q9WU28 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Pfdn5Q9WU28 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn5Q9WU28 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pfdn5Q9WU28 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pfdn5Q9WU28 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Pfdn5Q9WU28 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pfdn5Q9WU28 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn5Q9WU28 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn5Q9WU28 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn5Q9WU28 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pfdn5Q9WU28 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn5Q9WU28 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pfdn5Q9WU28 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pfdn5Q9WU28 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pfdn5Q9WU28 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn5Q9WU28 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn5Q9WU28 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn5Q9WU28 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.53■□□□□ 0.88
Pfdn5Q9WU28 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pfdn5Q9WU28 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pfdn5Q9WU28 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn5Q9WU28 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Pfdn5Q9WU28 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Pfdn5Q9WU28 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn5Q9WU28 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn5Q9WU28 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn5Q9WU28 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.5■□□□□ 0.87
Pfdn5Q9WU28 Rab21-202ENSMUST00000218831 843 ntBASIC20.5■□□□□ 0.87
Pfdn5Q9WU28 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.5■□□□□ 0.87
Pfdn5Q9WU28 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn5Q9WU28 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pfdn5Q9WU28 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pfdn5Q9WU28 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.48■□□□□ 0.87
Pfdn5Q9WU28 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pfdn5Q9WU28 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pfdn5Q9WU28 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pfdn5Q9WU28 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pfdn5Q9WU28 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pfdn5Q9WU28 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.47■□□□□ 0.87
Pfdn5Q9WU28 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pfdn5Q9WU28 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.45■□□□□ 0.86
Pfdn5Q9WU28 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pfdn5Q9WU28 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pfdn5Q9WU28 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pfdn5Q9WU28 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pfdn5Q9WU28 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pfdn5Q9WU28 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pfdn5Q9WU28 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pfdn5Q9WU28 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pfdn5Q9WU28 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pfdn5Q9WU28 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pfdn5Q9WU28 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.39■□□□□ 0.86
Pfdn5Q9WU28 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Pfdn5Q9WU28 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.39■□□□□ 0.85
Pfdn5Q9WU28 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pfdn5Q9WU28 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pfdn5Q9WU28 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pfdn5Q9WU28 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pfdn5Q9WU28 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms