Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.6■□□□□ 0.89
Rhox4bQ9JI43 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rhox4bQ9JI43 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rhox4bQ9JI43 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rhox4bQ9JI43 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rhox4bQ9JI43 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4bQ9JI43 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rhox4bQ9JI43 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhox4bQ9JI43 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhox4bQ9JI43 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rhox4bQ9JI43 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rhox4bQ9JI43 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rhox4bQ9JI43 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rhox4bQ9JI43 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rhox4bQ9JI43 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rhox4bQ9JI43 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.46■□□□□ 0.87
Rhox4bQ9JI43 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rhox4bQ9JI43 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.46■□□□□ 0.87
Rhox4bQ9JI43 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Rhox4bQ9JI43 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rhox4bQ9JI43 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rhox4bQ9JI43 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rhox4bQ9JI43 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.43■□□□□ 0.86
Rhox4bQ9JI43 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.43■□□□□ 0.86
Rhox4bQ9JI43 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rhox4bQ9JI43 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rhox4bQ9JI43 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.43■□□□□ 0.86
Rhox4bQ9JI43 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rhox4bQ9JI43 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rhox4bQ9JI43 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rhox4bQ9JI43 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Rhox4bQ9JI43 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rhox4bQ9JI43 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rhox4bQ9JI43 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rhox4bQ9JI43 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.39■□□□□ 0.85
Rhox4bQ9JI43 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rhox4bQ9JI43 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rhox4bQ9JI43 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4bQ9JI43 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4bQ9JI43 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rhox4bQ9JI43 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rhox4bQ9JI43 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Rhox4bQ9JI43 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.34■□□□□ 0.85
Rhox4bQ9JI43 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rhox4bQ9JI43 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rhox4bQ9JI43 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rhox4bQ9JI43 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rhox4bQ9JI43 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rhox4bQ9JI43 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rhox4bQ9JI43 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rhox4bQ9JI43 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4bQ9JI43 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rhox4bQ9JI43 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rhox4bQ9JI43 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rhox4bQ9JI43 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Rhox4bQ9JI43 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rhox4bQ9JI43 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rhox4bQ9JI43 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rhox4bQ9JI43 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rhox4bQ9JI43 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rhox4bQ9JI43 Gm25238-201ENSMUST00000174914 89 ntBASIC20.21■□□□□ 0.83
Rhox4bQ9JI43 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhox4bQ9JI43 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhox4bQ9JI43 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rhox4bQ9JI43 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhox4bQ9JI43 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rhox4bQ9JI43 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rhox4bQ9JI43 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rhox4bQ9JI43 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rhox4bQ9JI43 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.17■□□□□ 0.82
Rhox4bQ9JI43 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rhox4bQ9JI43 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhox4bQ9JI43 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rhox4bQ9JI43 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rhox4bQ9JI43 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.15■□□□□ 0.82
Rhox4bQ9JI43 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhox4bQ9JI43 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rhox4bQ9JI43 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rhox4bQ9JI43 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rhox4bQ9JI43 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhox4bQ9JI43 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rhox4bQ9JI43 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.12■□□□□ 0.81
Rhox4bQ9JI43 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rhox4bQ9JI43 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rhox4bQ9JI43 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rhox4bQ9JI43 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Rhox4bQ9JI43 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rhox4bQ9JI43 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rhox4bQ9JI43 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rhox4bQ9JI43 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rhox4bQ9JI43 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rhox4bQ9JI43 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rhox4bQ9JI43 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rhox4bQ9JI43 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rhox4bQ9JI43 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rhox4bQ9JI43 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rhox4bQ9JI43 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rhox4bQ9JI43 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rhox4bQ9JI43 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rhox4bQ9JI43 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms