Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ube4bQ9ES00 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
Ube4bQ9ES00 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ube4bQ9ES00 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Ube4bQ9ES00 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ube4bQ9ES00 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ube4bQ9ES00 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ube4bQ9ES00 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ube4bQ9ES00 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ube4bQ9ES00 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ube4bQ9ES00 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ube4bQ9ES00 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ube4bQ9ES00 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ube4bQ9ES00 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ube4bQ9ES00 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ube4bQ9ES00 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ube4bQ9ES00 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ube4bQ9ES00 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ube4bQ9ES00 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ube4bQ9ES00 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
Ube4bQ9ES00 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ube4bQ9ES00 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ube4bQ9ES00 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ube4bQ9ES00 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ube4bQ9ES00 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ube4bQ9ES00 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ube4bQ9ES00 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.58■■□□□ 1.53
Ube4bQ9ES00 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ube4bQ9ES00 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ube4bQ9ES00 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ube4bQ9ES00 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Ube4bQ9ES00 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ube4bQ9ES00 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ube4bQ9ES00 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ube4bQ9ES00 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.48■■□□□ 1.51
Ube4bQ9ES00 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ube4bQ9ES00 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4bQ9ES00 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ube4bQ9ES00 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.44■■□□□ 1.5
Ube4bQ9ES00 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ube4bQ9ES00 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ube4bQ9ES00 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ube4bQ9ES00 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ube4bQ9ES00 Amer2-203ENSMUST00000225247 2662 ntBASIC24.42■■□□□ 1.5
Ube4bQ9ES00 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.41■■□□□ 1.5
Ube4bQ9ES00 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ube4bQ9ES00 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ube4bQ9ES00 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.4■■□□□ 1.5
Ube4bQ9ES00 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ube4bQ9ES00 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ube4bQ9ES00 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
Ube4bQ9ES00 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Ube4bQ9ES00 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Ube4bQ9ES00 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ube4bQ9ES00 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Ube4bQ9ES00 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ube4bQ9ES00 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ube4bQ9ES00 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.29■■□□□ 1.48
Ube4bQ9ES00 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Ube4bQ9ES00 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ube4bQ9ES00 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ube4bQ9ES00 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ube4bQ9ES00 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Ube4bQ9ES00 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ube4bQ9ES00 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.27■■□□□ 1.48
Ube4bQ9ES00 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Ube4bQ9ES00 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ube4bQ9ES00 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ube4bQ9ES00 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ube4bQ9ES00 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ube4bQ9ES00 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ube4bQ9ES00 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.25■■□□□ 1.47
Ube4bQ9ES00 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ube4bQ9ES00 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ube4bQ9ES00 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ube4bQ9ES00 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ube4bQ9ES00 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Ube4bQ9ES00 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ube4bQ9ES00 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ube4bQ9ES00 Rab21-202ENSMUST00000218831 843 ntBASIC24.21■■□□□ 1.47
Ube4bQ9ES00 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Ube4bQ9ES00 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.47
Ube4bQ9ES00 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ube4bQ9ES00 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.2■■□□□ 1.46
Ube4bQ9ES00 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ube4bQ9ES00 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ube4bQ9ES00 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.17■■□□□ 1.46
Ube4bQ9ES00 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ube4bQ9ES00 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ube4bQ9ES00 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ube4bQ9ES00 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ube4bQ9ES00 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Ube4bQ9ES00 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.11■■□□□ 1.45
Ube4bQ9ES00 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Ube4bQ9ES00 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ube4bQ9ES00 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Ube4bQ9ES00 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ube4bQ9ES00 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ube4bQ9ES00 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ube4bQ9ES00 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms