Protein–RNA interactions for Protein: Q9ERE8

Tlnrd1, Talin rod domain-containing protein 1, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlnrd1Q9ERE8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.79■■□□□ 1.08
Tlnrd1Q9ERE8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tlnrd1Q9ERE8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tlnrd1Q9ERE8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tlnrd1Q9ERE8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.77■■□□□ 1.08
Tlnrd1Q9ERE8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tlnrd1Q9ERE8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tlnrd1Q9ERE8 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.75■■□□□ 1.07
Tlnrd1Q9ERE8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tlnrd1Q9ERE8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlnrd1Q9ERE8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlnrd1Q9ERE8 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.73■■□□□ 1.07
Tlnrd1Q9ERE8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlnrd1Q9ERE8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlnrd1Q9ERE8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tlnrd1Q9ERE8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tlnrd1Q9ERE8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tlnrd1Q9ERE8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tlnrd1Q9ERE8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tlnrd1Q9ERE8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
Tlnrd1Q9ERE8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tlnrd1Q9ERE8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.64■■□□□ 1.05
Tlnrd1Q9ERE8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tlnrd1Q9ERE8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tlnrd1Q9ERE8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Tlnrd1Q9ERE8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.59■■□□□ 1.05
Tlnrd1Q9ERE8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.59■■□□□ 1.05
Tlnrd1Q9ERE8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.58■■□□□ 1.05
Tlnrd1Q9ERE8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tlnrd1Q9ERE8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tlnrd1Q9ERE8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
Tlnrd1Q9ERE8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tlnrd1Q9ERE8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tlnrd1Q9ERE8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Tlnrd1Q9ERE8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tlnrd1Q9ERE8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tlnrd1Q9ERE8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
Tlnrd1Q9ERE8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tlnrd1Q9ERE8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tlnrd1Q9ERE8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tlnrd1Q9ERE8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tlnrd1Q9ERE8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tlnrd1Q9ERE8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tlnrd1Q9ERE8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tlnrd1Q9ERE8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tlnrd1Q9ERE8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tlnrd1Q9ERE8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tlnrd1Q9ERE8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tlnrd1Q9ERE8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tlnrd1Q9ERE8 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.46■■□□□ 1.03
Tlnrd1Q9ERE8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tlnrd1Q9ERE8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Tlnrd1Q9ERE8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tlnrd1Q9ERE8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tlnrd1Q9ERE8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tlnrd1Q9ERE8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tlnrd1Q9ERE8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tlnrd1Q9ERE8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tlnrd1Q9ERE8 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.4■■□□□ 1.02
Tlnrd1Q9ERE8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tlnrd1Q9ERE8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tlnrd1Q9ERE8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tlnrd1Q9ERE8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Tlnrd1Q9ERE8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Tlnrd1Q9ERE8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tlnrd1Q9ERE8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tlnrd1Q9ERE8 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.37■■□□□ 1.01
Tlnrd1Q9ERE8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tlnrd1Q9ERE8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Tlnrd1Q9ERE8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tlnrd1Q9ERE8 Gm26115-201ENSMUST00000175605 87 ntBASIC21.36■■□□□ 1.01
Tlnrd1Q9ERE8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tlnrd1Q9ERE8 Gm27322-201ENSMUST00000184007 104 ntBASIC21.35■■□□□ 1.01
Tlnrd1Q9ERE8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tlnrd1Q9ERE8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tlnrd1Q9ERE8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tlnrd1Q9ERE8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.31■■□□□ 1
Tlnrd1Q9ERE8 Gm8109-201ENSMUST00000194076 746 ntBASIC21.31■■□□□ 1
Tlnrd1Q9ERE8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tlnrd1Q9ERE8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tlnrd1Q9ERE8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tlnrd1Q9ERE8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tlnrd1Q9ERE8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tlnrd1Q9ERE8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tlnrd1Q9ERE8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Tlnrd1Q9ERE8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Tlnrd1Q9ERE8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Tlnrd1Q9ERE8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tlnrd1Q9ERE8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tlnrd1Q9ERE8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tlnrd1Q9ERE8 Amer2-203ENSMUST00000225247 2662 ntBASIC21.24■□□□□ 0.99
Tlnrd1Q9ERE8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tlnrd1Q9ERE8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tlnrd1Q9ERE8 Mipep-204ENSMUST00000225043 1548 ntBASIC21.21■□□□□ 0.99
Tlnrd1Q9ERE8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tlnrd1Q9ERE8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tlnrd1Q9ERE8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tlnrd1Q9ERE8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.17■□□□□ 0.98
Tlnrd1Q9ERE8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Tlnrd1Q9ERE8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 130.7 ms