Protein–RNA interactions for Protein: Q9EQ45

Vmn1r46, Vomeronasal type-1 receptor 46, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r46Q9EQ45 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r46Q9EQ45 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vmn1r46Q9EQ45 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vmn1r46Q9EQ45 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r46Q9EQ45 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r46Q9EQ45 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r46Q9EQ45 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.53■□□□□ 0.88
Vmn1r46Q9EQ45 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r46Q9EQ45 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.53■□□□□ 0.88
Vmn1r46Q9EQ45 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.52■□□□□ 0.88
Vmn1r46Q9EQ45 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r46Q9EQ45 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Vmn1r46Q9EQ45 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r46Q9EQ45 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r46Q9EQ45 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.49■□□□□ 0.87
Vmn1r46Q9EQ45 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r46Q9EQ45 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.48■□□□□ 0.87
Vmn1r46Q9EQ45 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Vmn1r46Q9EQ45 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r46Q9EQ45 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.46■□□□□ 0.87
Vmn1r46Q9EQ45 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r46Q9EQ45 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r46Q9EQ45 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r46Q9EQ45 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r46Q9EQ45 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r46Q9EQ45 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r46Q9EQ45 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r46Q9EQ45 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Vmn1r46Q9EQ45 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r46Q9EQ45 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r46Q9EQ45 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r46Q9EQ45 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Vmn1r46Q9EQ45 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r46Q9EQ45 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r46Q9EQ45 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.36■□□□□ 0.85
Vmn1r46Q9EQ45 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r46Q9EQ45 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r46Q9EQ45 Gm25262-201ENSMUST00000174934 133 ntBASIC20.35■□□□□ 0.85
Vmn1r46Q9EQ45 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r46Q9EQ45 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r46Q9EQ45 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r46Q9EQ45 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vmn1r46Q9EQ45 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r46Q9EQ45 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r46Q9EQ45 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r46Q9EQ45 Mipep-204ENSMUST00000225043 1548 ntBASIC20.31■□□□□ 0.84
Vmn1r46Q9EQ45 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r46Q9EQ45 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r46Q9EQ45 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r46Q9EQ45 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
Vmn1r46Q9EQ45 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r46Q9EQ45 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Vmn1r46Q9EQ45 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r46Q9EQ45 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r46Q9EQ45 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Vmn1r46Q9EQ45 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r46Q9EQ45 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vmn1r46Q9EQ45 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r46Q9EQ45 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r46Q9EQ45 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r46Q9EQ45 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.21■□□□□ 0.83
Vmn1r46Q9EQ45 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.21■□□□□ 0.83
Vmn1r46Q9EQ45 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Vmn1r46Q9EQ45 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r46Q9EQ45 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r46Q9EQ45 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r46Q9EQ45 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r46Q9EQ45 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r46Q9EQ45 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r46Q9EQ45 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r46Q9EQ45 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Vmn1r46Q9EQ45 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Vmn1r46Q9EQ45 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r46Q9EQ45 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r46Q9EQ45 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r46Q9EQ45 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r46Q9EQ45 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r46Q9EQ45 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Vmn1r46Q9EQ45 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.09■□□□□ 0.81
Vmn1r46Q9EQ45 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Vmn1r46Q9EQ45 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r46Q9EQ45 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r46Q9EQ45 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r46Q9EQ45 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r46Q9EQ45 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.07■□□□□ 0.8
Vmn1r46Q9EQ45 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.07■□□□□ 0.8
Vmn1r46Q9EQ45 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r46Q9EQ45 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r46Q9EQ45 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r46Q9EQ45 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.04■□□□□ 0.8
Vmn1r46Q9EQ45 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r46Q9EQ45 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r46Q9EQ45 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r46Q9EQ45 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r46Q9EQ45 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r46Q9EQ45 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r46Q9EQ45 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r46Q9EQ45 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Vmn1r46Q9EQ45 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r46Q9EQ45 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 285.4 ms