Protein–RNA interactions for Protein: Q9D7T1

Rep15, Rab15 effector protein, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rep15Q9D7T1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rep15Q9D7T1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rep15Q9D7T1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rep15Q9D7T1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rep15Q9D7T1 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.33■■□□□ 1.01
Rep15Q9D7T1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.32■■□□□ 1
Rep15Q9D7T1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rep15Q9D7T1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rep15Q9D7T1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Rep15Q9D7T1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rep15Q9D7T1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.27■■□□□ 1
Rep15Q9D7T1 Gm27325-201ENSMUST00000175467 74 ntBASIC21.27■■□□□ 1
Rep15Q9D7T1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rep15Q9D7T1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rep15Q9D7T1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rep15Q9D7T1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rep15Q9D7T1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rep15Q9D7T1 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.25■□□□□ 0.99
Rep15Q9D7T1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rep15Q9D7T1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rep15Q9D7T1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rep15Q9D7T1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rep15Q9D7T1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rep15Q9D7T1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rep15Q9D7T1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.17■□□□□ 0.98
Rep15Q9D7T1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.17■□□□□ 0.98
Rep15Q9D7T1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rep15Q9D7T1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rep15Q9D7T1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Rep15Q9D7T1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rep15Q9D7T1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rep15Q9D7T1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rep15Q9D7T1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Rep15Q9D7T1 Amer2-203ENSMUST00000225247 2662 ntBASIC21.12■□□□□ 0.97
Rep15Q9D7T1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rep15Q9D7T1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rep15Q9D7T1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rep15Q9D7T1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rep15Q9D7T1 Gm25238-201ENSMUST00000174914 89 ntBASIC21.1■□□□□ 0.97
Rep15Q9D7T1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rep15Q9D7T1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rep15Q9D7T1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rep15Q9D7T1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.06■□□□□ 0.96
Rep15Q9D7T1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rep15Q9D7T1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rep15Q9D7T1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rep15Q9D7T1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rep15Q9D7T1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rep15Q9D7T1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rep15Q9D7T1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rep15Q9D7T1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.99■□□□□ 0.95
Rep15Q9D7T1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rep15Q9D7T1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rep15Q9D7T1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rep15Q9D7T1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rep15Q9D7T1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rep15Q9D7T1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rep15Q9D7T1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rep15Q9D7T1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rep15Q9D7T1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.97■□□□□ 0.95
Rep15Q9D7T1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rep15Q9D7T1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.97■□□□□ 0.95
Rep15Q9D7T1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rep15Q9D7T1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rep15Q9D7T1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rep15Q9D7T1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rep15Q9D7T1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rep15Q9D7T1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Rep15Q9D7T1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rep15Q9D7T1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.95■□□□□ 0.94
Rep15Q9D7T1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rep15Q9D7T1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rep15Q9D7T1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rep15Q9D7T1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rep15Q9D7T1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rep15Q9D7T1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rep15Q9D7T1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rep15Q9D7T1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rep15Q9D7T1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rep15Q9D7T1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rep15Q9D7T1 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.86■□□□□ 0.93
Rep15Q9D7T1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Rep15Q9D7T1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rep15Q9D7T1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Rep15Q9D7T1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Rep15Q9D7T1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rep15Q9D7T1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.81■□□□□ 0.92
Rep15Q9D7T1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rep15Q9D7T1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rep15Q9D7T1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rep15Q9D7T1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.78■□□□□ 0.92
Rep15Q9D7T1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rep15Q9D7T1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rep15Q9D7T1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rep15Q9D7T1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.75■□□□□ 0.91
Rep15Q9D7T1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rep15Q9D7T1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rep15Q9D7T1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rep15Q9D7T1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.73■□□□□ 0.91
Rep15Q9D7T1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms