Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Sh2d6Q9D413 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh2d6Q9D413 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sh2d6Q9D413 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh2d6Q9D413 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh2d6Q9D413 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh2d6Q9D413 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sh2d6Q9D413 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.76■■□□□ 1.07
Sh2d6Q9D413 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Sh2d6Q9D413 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.75■■□□□ 1.07
Sh2d6Q9D413 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh2d6Q9D413 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh2d6Q9D413 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Sh2d6Q9D413 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sh2d6Q9D413 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sh2d6Q9D413 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh2d6Q9D413 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh2d6Q9D413 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d6Q9D413 Peli2-204ENSMUST00000226513 1320 ntBASIC21.66■■□□□ 1.06
Sh2d6Q9D413 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d6Q9D413 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d6Q9D413 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d6Q9D413 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.65■■□□□ 1.06
Sh2d6Q9D413 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.65■■□□□ 1.06
Sh2d6Q9D413 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d6Q9D413 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d6Q9D413 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d6Q9D413 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d6Q9D413 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Sh2d6Q9D413 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sh2d6Q9D413 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh2d6Q9D413 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.58■■□□□ 1.05
Sh2d6Q9D413 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sh2d6Q9D413 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.57■■□□□ 1.04
Sh2d6Q9D413 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sh2d6Q9D413 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh2d6Q9D413 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh2d6Q9D413 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Sh2d6Q9D413 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Sh2d6Q9D413 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh2d6Q9D413 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.55■■□□□ 1.04
Sh2d6Q9D413 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh2d6Q9D413 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh2d6Q9D413 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh2d6Q9D413 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh2d6Q9D413 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh2d6Q9D413 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Sh2d6Q9D413 Gm16148-201ENSMUST00000119653 893 ntBASIC21.5■■□□□ 1.03
Sh2d6Q9D413 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh2d6Q9D413 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh2d6Q9D413 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.45■■□□□ 1.02
Sh2d6Q9D413 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sh2d6Q9D413 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sh2d6Q9D413 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh2d6Q9D413 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh2d6Q9D413 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh2d6Q9D413 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sh2d6Q9D413 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh2d6Q9D413 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.36■■□□□ 1.01
Sh2d6Q9D413 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.36■■□□□ 1.01
Sh2d6Q9D413 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d6Q9D413 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d6Q9D413 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d6Q9D413 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2d6Q9D413 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Sh2d6Q9D413 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh2d6Q9D413 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.29■■□□□ 1
Sh2d6Q9D413 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh2d6Q9D413 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2d6Q9D413 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Sh2d6Q9D413 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sh2d6Q9D413 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Sh2d6Q9D413 Zfp131-205ENSMUST00000223812 663 ntBASIC21.28■■□□□ 1
Sh2d6Q9D413 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Sh2d6Q9D413 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.27■■□□□ 1
Sh2d6Q9D413 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh2d6Q9D413 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d6Q9D413 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d6Q9D413 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d6Q9D413 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d6Q9D413 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.24■□□□□ 0.99
Sh2d6Q9D413 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d6Q9D413 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d6Q9D413 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d6Q9D413 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Sh2d6Q9D413 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d6Q9D413 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d6Q9D413 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sh2d6Q9D413 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d6Q9D413 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d6Q9D413 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d6Q9D413 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.18■□□□□ 0.98
Sh2d6Q9D413 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d6Q9D413 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d6Q9D413 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.17■□□□□ 0.98
Sh2d6Q9D413 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d6Q9D413 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2d6Q9D413 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2d6Q9D413 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2d6Q9D413 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms