Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Peli2-204ENSMUST00000226513 1320 ntBASIC26.74■■□□□ 1.87
Lsm7Q9CQQ8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Lsm7Q9CQQ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.72■■□□□ 1.87
Lsm7Q9CQQ8 Gm16148-201ENSMUST00000119653 893 ntBASIC26.72■■□□□ 1.87
Lsm7Q9CQQ8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Lsm7Q9CQQ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Lsm7Q9CQQ8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.68■■□□□ 1.86
Lsm7Q9CQQ8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Lsm7Q9CQQ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Lsm7Q9CQQ8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Lsm7Q9CQQ8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Lsm7Q9CQQ8 Zfp131-205ENSMUST00000223812 663 ntBASIC26.66■■□□□ 1.86
Lsm7Q9CQQ8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Lsm7Q9CQQ8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Lsm7Q9CQQ8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Lsm7Q9CQQ8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Lsm7Q9CQQ8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Lsm7Q9CQQ8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Lsm7Q9CQQ8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Lsm7Q9CQQ8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Lsm7Q9CQQ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Lsm7Q9CQQ8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.54■■□□□ 1.84
Lsm7Q9CQQ8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Lsm7Q9CQQ8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Lsm7Q9CQQ8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Lsm7Q9CQQ8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Lsm7Q9CQQ8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.44■■□□□ 1.82
Lsm7Q9CQQ8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.44■■□□□ 1.82
Lsm7Q9CQQ8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Lsm7Q9CQQ8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Lsm7Q9CQQ8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Lsm7Q9CQQ8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Lsm7Q9CQQ8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
Lsm7Q9CQQ8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Lsm7Q9CQQ8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Lsm7Q9CQQ8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.39■■□□□ 1.82
Lsm7Q9CQQ8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Lsm7Q9CQQ8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Lsm7Q9CQQ8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Lsm7Q9CQQ8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Lsm7Q9CQQ8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.36■■□□□ 1.81
Lsm7Q9CQQ8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Lsm7Q9CQQ8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Lsm7Q9CQQ8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lsm7Q9CQQ8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lsm7Q9CQQ8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.32■■□□□ 1.8
Lsm7Q9CQQ8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Lsm7Q9CQQ8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
Lsm7Q9CQQ8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Lsm7Q9CQQ8 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.24■■□□□ 1.79
Lsm7Q9CQQ8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Lsm7Q9CQQ8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Lsm7Q9CQQ8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Lsm7Q9CQQ8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Lsm7Q9CQQ8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Lsm7Q9CQQ8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.21■■□□□ 1.79
Lsm7Q9CQQ8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Lsm7Q9CQQ8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Lsm7Q9CQQ8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Lsm7Q9CQQ8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.18■■□□□ 1.78
Lsm7Q9CQQ8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Lsm7Q9CQQ8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Lsm7Q9CQQ8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Lsm7Q9CQQ8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Lsm7Q9CQQ8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Lsm7Q9CQQ8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Lsm7Q9CQQ8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Lsm7Q9CQQ8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Lsm7Q9CQQ8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Lsm7Q9CQQ8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.12■■□□□ 1.77
Lsm7Q9CQQ8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Lsm7Q9CQQ8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Lsm7Q9CQQ8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Lsm7Q9CQQ8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
Lsm7Q9CQQ8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Lsm7Q9CQQ8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Lsm7Q9CQQ8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Lsm7Q9CQQ8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.03■■□□□ 1.76
Lsm7Q9CQQ8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Lsm7Q9CQQ8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Lsm7Q9CQQ8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Lsm7Q9CQQ8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Lsm7Q9CQQ8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Lsm7Q9CQQ8 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.98■■□□□ 1.75
Lsm7Q9CQQ8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.98■■□□□ 1.75
Lsm7Q9CQQ8 Gm45855-201ENSMUST00000212546 880 ntBASIC25.97■■□□□ 1.75
Lsm7Q9CQQ8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lsm7Q9CQQ8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.96■■□□□ 1.75
Lsm7Q9CQQ8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Lsm7Q9CQQ8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lsm7Q9CQQ8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Lsm7Q9CQQ8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Lsm7Q9CQQ8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Lsm7Q9CQQ8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Lsm7Q9CQQ8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.88■■□□□ 1.73
Lsm7Q9CQQ8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Lsm7Q9CQQ8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.87■■□□□ 1.73
Lsm7Q9CQQ8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Lsm7Q9CQQ8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Lsm7Q9CQQ8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms