Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Pcdhb2Q91Y00 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdhb2Q91Y00 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdhb2Q91Y00 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Pcdhb2Q91Y00 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Pcdhb2Q91Y00 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhb2Q91Y00 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhb2Q91Y00 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Pcdhb2Q91Y00 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Pcdhb2Q91Y00 Peli2-204ENSMUST00000226513 1320 ntBASIC27.74■■■□□ 2.03
Pcdhb2Q91Y00 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdhb2Q91Y00 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.73■■■□□ 2.03
Pcdhb2Q91Y00 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pcdhb2Q91Y00 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.72■■■□□ 2.03
Pcdhb2Q91Y00 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pcdhb2Q91Y00 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pcdhb2Q91Y00 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pcdhb2Q91Y00 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Pcdhb2Q91Y00 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdhb2Q91Y00 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdhb2Q91Y00 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
Pcdhb2Q91Y00 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
Pcdhb2Q91Y00 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Pcdhb2Q91Y00 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.66■■■□□ 2.02
Pcdhb2Q91Y00 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdhb2Q91Y00 Gm16148-201ENSMUST00000119653 893 ntBASIC27.62■■■□□ 2.01
Pcdhb2Q91Y00 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pcdhb2Q91Y00 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Pcdhb2Q91Y00 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
Pcdhb2Q91Y00 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdhb2Q91Y00 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Pcdhb2Q91Y00 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.57■■■□□ 2
Pcdhb2Q91Y00 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pcdhb2Q91Y00 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.53■■■□□ 2
Pcdhb2Q91Y00 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Pcdhb2Q91Y00 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhb2Q91Y00 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
Pcdhb2Q91Y00 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhb2Q91Y00 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhb2Q91Y00 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdhb2Q91Y00 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhb2Q91Y00 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhb2Q91Y00 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhb2Q91Y00 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdhb2Q91Y00 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdhb2Q91Y00 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhb2Q91Y00 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.38■■□□□ 1.97
Pcdhb2Q91Y00 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdhb2Q91Y00 Zfp131-205ENSMUST00000223812 663 ntBASIC27.37■■□□□ 1.97
Pcdhb2Q91Y00 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdhb2Q91Y00 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhb2Q91Y00 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.35■■□□□ 1.97
Pcdhb2Q91Y00 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhb2Q91Y00 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdhb2Q91Y00 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdhb2Q91Y00 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdhb2Q91Y00 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Pcdhb2Q91Y00 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pcdhb2Q91Y00 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Pcdhb2Q91Y00 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Pcdhb2Q91Y00 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
Pcdhb2Q91Y00 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdhb2Q91Y00 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdhb2Q91Y00 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdhb2Q91Y00 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdhb2Q91Y00 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdhb2Q91Y00 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdhb2Q91Y00 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.23■■□□□ 1.95
Pcdhb2Q91Y00 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.23■■□□□ 1.95
Pcdhb2Q91Y00 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdhb2Q91Y00 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Pcdhb2Q91Y00 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdhb2Q91Y00 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.22■■□□□ 1.95
Pcdhb2Q91Y00 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.21■■□□□ 1.95
Pcdhb2Q91Y00 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.21■■□□□ 1.95
Pcdhb2Q91Y00 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Pcdhb2Q91Y00 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdhb2Q91Y00 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.19■■□□□ 1.94
Pcdhb2Q91Y00 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
Pcdhb2Q91Y00 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.18■■□□□ 1.94
Pcdhb2Q91Y00 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.17■■□□□ 1.94
Pcdhb2Q91Y00 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdhb2Q91Y00 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.15■■□□□ 1.94
Pcdhb2Q91Y00 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdhb2Q91Y00 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhb2Q91Y00 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhb2Q91Y00 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhb2Q91Y00 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
Pcdhb2Q91Y00 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.1■■□□□ 1.93
Pcdhb2Q91Y00 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdhb2Q91Y00 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdhb2Q91Y00 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Pcdhb2Q91Y00 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.09■■□□□ 1.93
Pcdhb2Q91Y00 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Pcdhb2Q91Y00 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.06■■□□□ 1.92
Pcdhb2Q91Y00 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhb2Q91Y00 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.04■■□□□ 1.92
Pcdhb2Q91Y00 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdhb2Q91Y00 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdhb2Q91Y00 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms