Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb3Q91XZ7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.8■■□□□ 1.72
Pcdhb3Q91XZ7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
Pcdhb3Q91XZ7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Pcdhb3Q91XZ7 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.78■■□□□ 1.72
Pcdhb3Q91XZ7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb3Q91XZ7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhb3Q91XZ7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Pcdhb3Q91XZ7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb3Q91XZ7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb3Q91XZ7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb3Q91XZ7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.7■■□□□ 1.71
Pcdhb3Q91XZ7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb3Q91XZ7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb3Q91XZ7 Gm26115-201ENSMUST00000175605 87 ntBASIC25.69■■□□□ 1.7
Pcdhb3Q91XZ7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb3Q91XZ7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb3Q91XZ7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Pcdhb3Q91XZ7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.66■■□□□ 1.7
Pcdhb3Q91XZ7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb3Q91XZ7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb3Q91XZ7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb3Q91XZ7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdhb3Q91XZ7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb3Q91XZ7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb3Q91XZ7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb3Q91XZ7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb3Q91XZ7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb3Q91XZ7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb3Q91XZ7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb3Q91XZ7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb3Q91XZ7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb3Q91XZ7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.56■■□□□ 1.68
Pcdhb3Q91XZ7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb3Q91XZ7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb3Q91XZ7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.54■■□□□ 1.68
Pcdhb3Q91XZ7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.54■■□□□ 1.68
Pcdhb3Q91XZ7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Pcdhb3Q91XZ7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb3Q91XZ7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb3Q91XZ7 Gm8109-201ENSMUST00000194076 746 ntBASIC25.51■■□□□ 1.67
Pcdhb3Q91XZ7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb3Q91XZ7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb3Q91XZ7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb3Q91XZ7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb3Q91XZ7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb3Q91XZ7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.49■■□□□ 1.67
Pcdhb3Q91XZ7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Pcdhb3Q91XZ7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb3Q91XZ7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb3Q91XZ7 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.46■■□□□ 1.67
Pcdhb3Q91XZ7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Pcdhb3Q91XZ7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhb3Q91XZ7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.42■■□□□ 1.66
Pcdhb3Q91XZ7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhb3Q91XZ7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Pcdhb3Q91XZ7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb3Q91XZ7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Pcdhb3Q91XZ7 Amer2-203ENSMUST00000225247 2662 ntBASIC25.4■■□□□ 1.66
Pcdhb3Q91XZ7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb3Q91XZ7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb3Q91XZ7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.34■■□□□ 1.65
Pcdhb3Q91XZ7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb3Q91XZ7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Pcdhb3Q91XZ7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb3Q91XZ7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Pcdhb3Q91XZ7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb3Q91XZ7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb3Q91XZ7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb3Q91XZ7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb3Q91XZ7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb3Q91XZ7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb3Q91XZ7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb3Q91XZ7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb3Q91XZ7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Pcdhb3Q91XZ7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb3Q91XZ7 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.25■■□□□ 1.63
Pcdhb3Q91XZ7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb3Q91XZ7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb3Q91XZ7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb3Q91XZ7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb3Q91XZ7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.23■■□□□ 1.63
Pcdhb3Q91XZ7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb3Q91XZ7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb3Q91XZ7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb3Q91XZ7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb3Q91XZ7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb3Q91XZ7 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.16■■□□□ 1.62
Pcdhb3Q91XZ7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb3Q91XZ7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb3Q91XZ7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhb3Q91XZ7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb3Q91XZ7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.13■■□□□ 1.61
Pcdhb3Q91XZ7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb3Q91XZ7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms