Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ddx41Q91VN6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ddx41Q91VN6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Ddx41Q91VN6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ddx41Q91VN6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ddx41Q91VN6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Ddx41Q91VN6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
Ddx41Q91VN6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
Ddx41Q91VN6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Ddx41Q91VN6 Mipep-204ENSMUST00000225043 1548 ntBASIC29.82■■■□□ 2.36
Ddx41Q91VN6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ddx41Q91VN6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Ddx41Q91VN6 Peli2-204ENSMUST00000226513 1320 ntBASIC29.78■■■□□ 2.36
Ddx41Q91VN6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Ddx41Q91VN6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
Ddx41Q91VN6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Ddx41Q91VN6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Ddx41Q91VN6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ddx41Q91VN6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ddx41Q91VN6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.74■■■□□ 2.35
Ddx41Q91VN6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Ddx41Q91VN6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ddx41Q91VN6 Gm16148-201ENSMUST00000119653 893 ntBASIC29.73■■■□□ 2.35
Ddx41Q91VN6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.72■■■□□ 2.35
Ddx41Q91VN6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ddx41Q91VN6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
Ddx41Q91VN6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Ddx41Q91VN6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ddx41Q91VN6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Ddx41Q91VN6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.67■■■□□ 2.34
Ddx41Q91VN6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
Ddx41Q91VN6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Ddx41Q91VN6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ddx41Q91VN6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ddx41Q91VN6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ddx41Q91VN6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ddx41Q91VN6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ddx41Q91VN6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Ddx41Q91VN6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ddx41Q91VN6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ddx41Q91VN6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ddx41Q91VN6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Ddx41Q91VN6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.47■■■□□ 2.31
Ddx41Q91VN6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Ddx41Q91VN6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.47■■■□□ 2.31
Ddx41Q91VN6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.47■■■□□ 2.31
Ddx41Q91VN6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ddx41Q91VN6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ddx41Q91VN6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ddx41Q91VN6 Zxda-201ENSMUST00000117281 2621 ntBASIC29.41■■■□□ 2.3
Ddx41Q91VN6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ddx41Q91VN6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
Ddx41Q91VN6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Ddx41Q91VN6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ddx41Q91VN6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.36■■■□□ 2.29
Ddx41Q91VN6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ddx41Q91VN6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.35■■■□□ 2.29
Ddx41Q91VN6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ddx41Q91VN6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.33■■■□□ 2.29
Ddx41Q91VN6 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.33■■■□□ 2.29
Ddx41Q91VN6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ddx41Q91VN6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ddx41Q91VN6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.28■■■□□ 2.28
Ddx41Q91VN6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.28■■■□□ 2.28
Ddx41Q91VN6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.27■■■□□ 2.28
Ddx41Q91VN6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ddx41Q91VN6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ddx41Q91VN6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ddx41Q91VN6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Ddx41Q91VN6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Ddx41Q91VN6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Ddx41Q91VN6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ddx41Q91VN6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Ddx41Q91VN6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ddx41Q91VN6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ddx41Q91VN6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.25
Ddx41Q91VN6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Ddx41Q91VN6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ddx41Q91VN6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ddx41Q91VN6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ddx41Q91VN6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.09■■■□□ 2.25
Ddx41Q91VN6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.09■■■□□ 2.25
Ddx41Q91VN6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx41Q91VN6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx41Q91VN6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Ddx41Q91VN6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Ddx41Q91VN6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.02■■■□□ 2.24
Ddx41Q91VN6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ddx41Q91VN6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ddx41Q91VN6 Gm45855-201ENSMUST00000212546 880 ntBASIC29.01■■■□□ 2.23
Ddx41Q91VN6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ddx41Q91VN6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29■■■□□ 2.23
Ddx41Q91VN6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
Ddx41Q91VN6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.99■■■□□ 2.23
Ddx41Q91VN6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.98■■■□□ 2.23
Ddx41Q91VN6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ddx41Q91VN6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx41Q91VN6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
Ddx41Q91VN6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ddx41Q91VN6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms