Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm45855-201ENSMUST00000212546 880 ntBASIC33.42■■■□□ 2.94
StrcQ8VIM6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
StrcQ8VIM6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
StrcQ8VIM6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC33.37■■■□□ 2.93
StrcQ8VIM6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
StrcQ8VIM6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
StrcQ8VIM6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC33.33■■■□□ 2.93
StrcQ8VIM6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
StrcQ8VIM6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
StrcQ8VIM6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
StrcQ8VIM6 Gm9397-201ENSMUST00000200125 605 ntBASIC33.24■■■□□ 2.91
StrcQ8VIM6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
StrcQ8VIM6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
StrcQ8VIM6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
StrcQ8VIM6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
StrcQ8VIM6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.9
StrcQ8VIM6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
StrcQ8VIM6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC33.15■■■□□ 2.9
StrcQ8VIM6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
StrcQ8VIM6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC33.11■■■□□ 2.89
StrcQ8VIM6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC33.11■■■□□ 2.89
StrcQ8VIM6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
StrcQ8VIM6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
StrcQ8VIM6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
StrcQ8VIM6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
StrcQ8VIM6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
StrcQ8VIM6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
StrcQ8VIM6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
StrcQ8VIM6 Mipep-204ENSMUST00000225043 1548 ntBASIC33.04■■■□□ 2.88
StrcQ8VIM6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC33.03■■■□□ 2.88
StrcQ8VIM6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC33.02■■■□□ 2.88
StrcQ8VIM6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC33.01■■■□□ 2.87
StrcQ8VIM6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
StrcQ8VIM6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
StrcQ8VIM6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
StrcQ8VIM6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
StrcQ8VIM6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
StrcQ8VIM6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
StrcQ8VIM6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.87
StrcQ8VIM6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
StrcQ8VIM6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
StrcQ8VIM6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
StrcQ8VIM6 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.93■■■□□ 2.86
StrcQ8VIM6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
StrcQ8VIM6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
StrcQ8VIM6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
StrcQ8VIM6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.88■■■□□ 2.85
StrcQ8VIM6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC32.88■■■□□ 2.85
StrcQ8VIM6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32.88■■■□□ 2.85
StrcQ8VIM6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
StrcQ8VIM6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.85■■■□□ 2.85
StrcQ8VIM6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.82■■■□□ 2.85
StrcQ8VIM6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.81■■■□□ 2.84
StrcQ8VIM6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
StrcQ8VIM6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.79■■■□□ 2.84
StrcQ8VIM6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
StrcQ8VIM6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.78■■■□□ 2.84
StrcQ8VIM6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
StrcQ8VIM6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32.74■■■□□ 2.83
StrcQ8VIM6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
StrcQ8VIM6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
StrcQ8VIM6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
StrcQ8VIM6 Gm24970-201ENSMUST00000175582 82 ntBASIC32.67■■■□□ 2.82
StrcQ8VIM6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32.66■■■□□ 2.82
StrcQ8VIM6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
StrcQ8VIM6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32.63■■■□□ 2.81
StrcQ8VIM6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
StrcQ8VIM6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
StrcQ8VIM6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
StrcQ8VIM6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.52■■■□□ 2.8
StrcQ8VIM6 Gm8503-201ENSMUST00000118131 455 ntBASIC32.5■■■□□ 2.79
StrcQ8VIM6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC32.47■■■□□ 2.79
StrcQ8VIM6 Gm9939-201ENSMUST00000067161 1154 ntBASIC32.46■■■□□ 2.79
StrcQ8VIM6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
StrcQ8VIM6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.44■■■□□ 2.78
StrcQ8VIM6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
StrcQ8VIM6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
StrcQ8VIM6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
StrcQ8VIM6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
StrcQ8VIM6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
StrcQ8VIM6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
StrcQ8VIM6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
StrcQ8VIM6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
StrcQ8VIM6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.32■■■□□ 2.76
StrcQ8VIM6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
StrcQ8VIM6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
StrcQ8VIM6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
StrcQ8VIM6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.27■■■□□ 2.76
StrcQ8VIM6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.76
StrcQ8VIM6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
StrcQ8VIM6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
StrcQ8VIM6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
StrcQ8VIM6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
StrcQ8VIM6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
StrcQ8VIM6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
StrcQ8VIM6 Gm6821-201ENSMUST00000107540 542 ntBASIC32.19■■■□□ 2.74
StrcQ8VIM6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.19■■■□□ 2.74
StrcQ8VIM6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.16■■■□□ 2.74
StrcQ8VIM6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
StrcQ8VIM6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms