Protein–RNA interactions for Protein: Q8VE09

Ttc39c, Tetratricopeptide repeat protein 39C, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39cQ8VE09 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.1■■□□□ 1.93
Ttc39cQ8VE09 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ttc39cQ8VE09 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ttc39cQ8VE09 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Ttc39cQ8VE09 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ttc39cQ8VE09 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ttc39cQ8VE09 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ttc39cQ8VE09 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Ttc39cQ8VE09 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Ttc39cQ8VE09 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ttc39cQ8VE09 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Ttc39cQ8VE09 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Ttc39cQ8VE09 Peli2-204ENSMUST00000226513 1320 ntBASIC26.94■■□□□ 1.9
Ttc39cQ8VE09 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.94■■□□□ 1.9
Ttc39cQ8VE09 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ttc39cQ8VE09 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ttc39cQ8VE09 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ttc39cQ8VE09 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.89■■□□□ 1.9
Ttc39cQ8VE09 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Ttc39cQ8VE09 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ttc39cQ8VE09 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Ttc39cQ8VE09 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.89■■□□□ 1.89
Ttc39cQ8VE09 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ttc39cQ8VE09 Gm16148-201ENSMUST00000119653 893 ntBASIC26.88■■□□□ 1.89
Ttc39cQ8VE09 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
Ttc39cQ8VE09 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ttc39cQ8VE09 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ttc39cQ8VE09 Zfp131-205ENSMUST00000223812 663 ntBASIC26.83■■□□□ 1.89
Ttc39cQ8VE09 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ttc39cQ8VE09 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ttc39cQ8VE09 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ttc39cQ8VE09 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ttc39cQ8VE09 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ttc39cQ8VE09 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ttc39cQ8VE09 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ttc39cQ8VE09 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.73■■□□□ 1.87
Ttc39cQ8VE09 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Ttc39cQ8VE09 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Ttc39cQ8VE09 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Ttc39cQ8VE09 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ttc39cQ8VE09 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Ttc39cQ8VE09 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ttc39cQ8VE09 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.67■■□□□ 1.86
Ttc39cQ8VE09 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.67■■□□□ 1.86
Ttc39cQ8VE09 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Ttc39cQ8VE09 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ttc39cQ8VE09 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ttc39cQ8VE09 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ttc39cQ8VE09 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ttc39cQ8VE09 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
Ttc39cQ8VE09 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.59■■□□□ 1.85
Ttc39cQ8VE09 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.59■■□□□ 1.85
Ttc39cQ8VE09 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.58■■□□□ 1.85
Ttc39cQ8VE09 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Ttc39cQ8VE09 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ttc39cQ8VE09 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ttc39cQ8VE09 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ttc39cQ8VE09 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
Ttc39cQ8VE09 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ttc39cQ8VE09 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.49■■□□□ 1.83
Ttc39cQ8VE09 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.48■■□□□ 1.83
Ttc39cQ8VE09 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Ttc39cQ8VE09 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ttc39cQ8VE09 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ttc39cQ8VE09 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ttc39cQ8VE09 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ttc39cQ8VE09 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ttc39cQ8VE09 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ttc39cQ8VE09 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.39■■□□□ 1.82
Ttc39cQ8VE09 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ttc39cQ8VE09 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Ttc39cQ8VE09 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ttc39cQ8VE09 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ttc39cQ8VE09 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.37■■□□□ 1.81
Ttc39cQ8VE09 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Ttc39cQ8VE09 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.36■■□□□ 1.81
Ttc39cQ8VE09 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ttc39cQ8VE09 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ttc39cQ8VE09 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ttc39cQ8VE09 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Ttc39cQ8VE09 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ttc39cQ8VE09 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ttc39cQ8VE09 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ttc39cQ8VE09 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ttc39cQ8VE09 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.3■■□□□ 1.8
Ttc39cQ8VE09 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ttc39cQ8VE09 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ttc39cQ8VE09 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ttc39cQ8VE09 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ttc39cQ8VE09 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
Ttc39cQ8VE09 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ttc39cQ8VE09 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.23■■□□□ 1.79
Ttc39cQ8VE09 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ttc39cQ8VE09 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ttc39cQ8VE09 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ttc39cQ8VE09 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Ttc39cQ8VE09 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ttc39cQ8VE09 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ttc39cQ8VE09 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.17■■□□□ 1.78
Ttc39cQ8VE09 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms