Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cfap54Q8C6S9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cfap54Q8C6S9 Peli2-204ENSMUST00000226513 1320 ntBASIC26.27■■□□□ 1.8
Cfap54Q8C6S9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cfap54Q8C6S9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Cfap54Q8C6S9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cfap54Q8C6S9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cfap54Q8C6S9 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.26■■□□□ 1.79
Cfap54Q8C6S9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cfap54Q8C6S9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Cfap54Q8C6S9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cfap54Q8C6S9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.2■■□□□ 1.78
Cfap54Q8C6S9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cfap54Q8C6S9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cfap54Q8C6S9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cfap54Q8C6S9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cfap54Q8C6S9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cfap54Q8C6S9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cfap54Q8C6S9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Cfap54Q8C6S9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cfap54Q8C6S9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cfap54Q8C6S9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.14■■□□□ 1.78
Cfap54Q8C6S9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.12■■□□□ 1.77
Cfap54Q8C6S9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cfap54Q8C6S9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Cfap54Q8C6S9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cfap54Q8C6S9 Gm9397-201ENSMUST00000200125 605 ntBASIC26.08■■□□□ 1.76
Cfap54Q8C6S9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Cfap54Q8C6S9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Cfap54Q8C6S9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Cfap54Q8C6S9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Cfap54Q8C6S9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.01■■□□□ 1.75
Cfap54Q8C6S9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Cfap54Q8C6S9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.99■■□□□ 1.75
Cfap54Q8C6S9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Cfap54Q8C6S9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.99■■□□□ 1.75
Cfap54Q8C6S9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
Cfap54Q8C6S9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Cfap54Q8C6S9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.97■■□□□ 1.75
Cfap54Q8C6S9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Cfap54Q8C6S9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cfap54Q8C6S9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
Cfap54Q8C6S9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Cfap54Q8C6S9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.94■■□□□ 1.74
Cfap54Q8C6S9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.94■■□□□ 1.74
Cfap54Q8C6S9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cfap54Q8C6S9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Cfap54Q8C6S9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cfap54Q8C6S9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.88■■□□□ 1.73
Cfap54Q8C6S9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cfap54Q8C6S9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.87■■□□□ 1.73
Cfap54Q8C6S9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cfap54Q8C6S9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cfap54Q8C6S9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cfap54Q8C6S9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
Cfap54Q8C6S9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Cfap54Q8C6S9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cfap54Q8C6S9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cfap54Q8C6S9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cfap54Q8C6S9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.79■■□□□ 1.72
Cfap54Q8C6S9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cfap54Q8C6S9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.76■■□□□ 1.71
Cfap54Q8C6S9 Gm24970-201ENSMUST00000175582 82 ntBASIC25.74■■□□□ 1.71
Cfap54Q8C6S9 Gm8503-201ENSMUST00000118131 455 ntBASIC25.73■■□□□ 1.71
Cfap54Q8C6S9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cfap54Q8C6S9 Mipep-204ENSMUST00000225043 1548 ntBASIC25.72■■□□□ 1.71
Cfap54Q8C6S9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Cfap54Q8C6S9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Cfap54Q8C6S9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.68■■□□□ 1.7
Cfap54Q8C6S9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cfap54Q8C6S9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.63■■□□□ 1.69
Cfap54Q8C6S9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cfap54Q8C6S9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cfap54Q8C6S9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Cfap54Q8C6S9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.62■■□□□ 1.69
Cfap54Q8C6S9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cfap54Q8C6S9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.59■■□□□ 1.69
Cfap54Q8C6S9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Cfap54Q8C6S9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cfap54Q8C6S9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cfap54Q8C6S9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cfap54Q8C6S9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.54■■□□□ 1.68
Cfap54Q8C6S9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cfap54Q8C6S9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Cfap54Q8C6S9 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.52■■□□□ 1.68
Cfap54Q8C6S9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cfap54Q8C6S9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cfap54Q8C6S9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cfap54Q8C6S9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cfap54Q8C6S9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.41■■□□□ 1.66
Cfap54Q8C6S9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Cfap54Q8C6S9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cfap54Q8C6S9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cfap54Q8C6S9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Cfap54Q8C6S9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
Cfap54Q8C6S9 Gm6821-201ENSMUST00000107540 542 ntBASIC25.34■■□□□ 1.65
Cfap54Q8C6S9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cfap54Q8C6S9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cfap54Q8C6S9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cfap54Q8C6S9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.28■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms