Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam78bQ8BQN5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fam78bQ8BQN5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78bQ8BQN5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Fam78bQ8BQN5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78bQ8BQN5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78bQ8BQN5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Fam78bQ8BQN5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78bQ8BQN5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fam78bQ8BQN5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam78bQ8BQN5 Rab21-202ENSMUST00000218831 843 ntBASIC20.5■□□□□ 0.87
Fam78bQ8BQN5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78bQ8BQN5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78bQ8BQN5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78bQ8BQN5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78bQ8BQN5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78bQ8BQN5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam78bQ8BQN5 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.47■□□□□ 0.87
Fam78bQ8BQN5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam78bQ8BQN5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam78bQ8BQN5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam78bQ8BQN5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Fam78bQ8BQN5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78bQ8BQN5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78bQ8BQN5 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.41■□□□□ 0.86
Fam78bQ8BQN5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Fam78bQ8BQN5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam78bQ8BQN5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Fam78bQ8BQN5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Fam78bQ8BQN5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.39■□□□□ 0.85
Fam78bQ8BQN5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.39■□□□□ 0.85
Fam78bQ8BQN5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.38■□□□□ 0.85
Fam78bQ8BQN5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fam78bQ8BQN5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fam78bQ8BQN5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Fam78bQ8BQN5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fam78bQ8BQN5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fam78bQ8BQN5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fam78bQ8BQN5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Fam78bQ8BQN5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Fam78bQ8BQN5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam78bQ8BQN5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam78bQ8BQN5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Fam78bQ8BQN5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Fam78bQ8BQN5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam78bQ8BQN5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam78bQ8BQN5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam78bQ8BQN5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Fam78bQ8BQN5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Fam78bQ8BQN5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Fam78bQ8BQN5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam78bQ8BQN5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam78bQ8BQN5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam78bQ8BQN5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam78bQ8BQN5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam78bQ8BQN5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78bQ8BQN5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78bQ8BQN5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Fam78bQ8BQN5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78bQ8BQN5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Fam78bQ8BQN5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.2■□□□□ 0.82
Fam78bQ8BQN5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78bQ8BQN5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78bQ8BQN5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Fam78bQ8BQN5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Fam78bQ8BQN5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.17■□□□□ 0.82
Fam78bQ8BQN5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam78bQ8BQN5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78bQ8BQN5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78bQ8BQN5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78bQ8BQN5 Gm25262-201ENSMUST00000174934 133 ntBASIC20.15■□□□□ 0.82
Fam78bQ8BQN5 Mipep-204ENSMUST00000225043 1548 ntBASIC20.15■□□□□ 0.82
Fam78bQ8BQN5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fam78bQ8BQN5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam78bQ8BQN5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam78bQ8BQN5 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.12■□□□□ 0.81
Fam78bQ8BQN5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam78bQ8BQN5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Fam78bQ8BQN5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Fam78bQ8BQN5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fam78bQ8BQN5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.1■□□□□ 0.81
Fam78bQ8BQN5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam78bQ8BQN5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam78bQ8BQN5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam78bQ8BQN5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Fam78bQ8BQN5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fam78bQ8BQN5 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.07■□□□□ 0.8
Fam78bQ8BQN5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fam78bQ8BQN5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fam78bQ8BQN5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78bQ8BQN5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78bQ8BQN5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78bQ8BQN5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Fam78bQ8BQN5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78bQ8BQN5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms