Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdkl3Q8BLF2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdkl3Q8BLF2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdkl3Q8BLF2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdkl3Q8BLF2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdkl3Q8BLF2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Cdkl3Q8BLF2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdkl3Q8BLF2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cdkl3Q8BLF2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cdkl3Q8BLF2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Cdkl3Q8BLF2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cdkl3Q8BLF2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdkl3Q8BLF2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdkl3Q8BLF2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cdkl3Q8BLF2 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.11■■□□□ 1.13
Cdkl3Q8BLF2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cdkl3Q8BLF2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cdkl3Q8BLF2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cdkl3Q8BLF2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Cdkl3Q8BLF2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cdkl3Q8BLF2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cdkl3Q8BLF2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cdkl3Q8BLF2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cdkl3Q8BLF2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.07■■□□□ 1.12
Cdkl3Q8BLF2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cdkl3Q8BLF2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cdkl3Q8BLF2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.05■■□□□ 1.12
Cdkl3Q8BLF2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cdkl3Q8BLF2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdkl3Q8BLF2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cdkl3Q8BLF2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Cdkl3Q8BLF2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cdkl3Q8BLF2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdkl3Q8BLF2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cdkl3Q8BLF2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cdkl3Q8BLF2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cdkl3Q8BLF2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdkl3Q8BLF2 Amer2-203ENSMUST00000225247 2662 ntBASIC22■■□□□ 1.11
Cdkl3Q8BLF2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdkl3Q8BLF2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cdkl3Q8BLF2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cdkl3Q8BLF2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdkl3Q8BLF2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cdkl3Q8BLF2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdkl3Q8BLF2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl3Q8BLF2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdkl3Q8BLF2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Cdkl3Q8BLF2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.93■■□□□ 1.1
Cdkl3Q8BLF2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl3Q8BLF2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl3Q8BLF2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdkl3Q8BLF2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl3Q8BLF2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl3Q8BLF2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdkl3Q8BLF2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Cdkl3Q8BLF2 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.88■■□□□ 1.09
Cdkl3Q8BLF2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdkl3Q8BLF2 Gm27325-201ENSMUST00000175467 74 ntBASIC21.87■■□□□ 1.09
Cdkl3Q8BLF2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
Cdkl3Q8BLF2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cdkl3Q8BLF2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cdkl3Q8BLF2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.83■■□□□ 1.09
Cdkl3Q8BLF2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cdkl3Q8BLF2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Cdkl3Q8BLF2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdkl3Q8BLF2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.82■■□□□ 1.08
Cdkl3Q8BLF2 Gm25238-201ENSMUST00000174914 89 ntBASIC21.82■■□□□ 1.08
Cdkl3Q8BLF2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cdkl3Q8BLF2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Cdkl3Q8BLF2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cdkl3Q8BLF2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdkl3Q8BLF2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdkl3Q8BLF2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdkl3Q8BLF2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Cdkl3Q8BLF2 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.76■■□□□ 1.07
Cdkl3Q8BLF2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cdkl3Q8BLF2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Cdkl3Q8BLF2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdkl3Q8BLF2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdkl3Q8BLF2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdkl3Q8BLF2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdkl3Q8BLF2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdkl3Q8BLF2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdkl3Q8BLF2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cdkl3Q8BLF2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.7■■□□□ 1.06
Cdkl3Q8BLF2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkl3Q8BLF2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.67■■□□□ 1.06
Cdkl3Q8BLF2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdkl3Q8BLF2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl3Q8BLF2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl3Q8BLF2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.65■■□□□ 1.06
Cdkl3Q8BLF2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl3Q8BLF2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cdkl3Q8BLF2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdkl3Q8BLF2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cdkl3Q8BLF2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdkl3Q8BLF2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl3Q8BLF2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl3Q8BLF2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl3Q8BLF2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms