Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim23Q8BGX0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim23Q8BGX0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.47■■□□□ 1.67
Trim23Q8BGX0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Trim23Q8BGX0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Trim23Q8BGX0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trim23Q8BGX0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trim23Q8BGX0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Trim23Q8BGX0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim23Q8BGX0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Trim23Q8BGX0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Trim23Q8BGX0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim23Q8BGX0 Peli2-204ENSMUST00000226513 1320 ntBASIC25.38■■□□□ 1.65
Trim23Q8BGX0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.37■■□□□ 1.65
Trim23Q8BGX0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Trim23Q8BGX0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim23Q8BGX0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trim23Q8BGX0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Trim23Q8BGX0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.33■■□□□ 1.65
Trim23Q8BGX0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Trim23Q8BGX0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Trim23Q8BGX0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Trim23Q8BGX0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim23Q8BGX0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Trim23Q8BGX0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim23Q8BGX0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim23Q8BGX0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim23Q8BGX0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim23Q8BGX0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim23Q8BGX0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Trim23Q8BGX0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Trim23Q8BGX0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Trim23Q8BGX0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.21■■□□□ 1.63
Trim23Q8BGX0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Trim23Q8BGX0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
Trim23Q8BGX0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Trim23Q8BGX0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
Trim23Q8BGX0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim23Q8BGX0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim23Q8BGX0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim23Q8BGX0 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.15■■□□□ 1.62
Trim23Q8BGX0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trim23Q8BGX0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim23Q8BGX0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim23Q8BGX0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trim23Q8BGX0 Gm16148-201ENSMUST00000119653 893 ntBASIC25.1■■□□□ 1.61
Trim23Q8BGX0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Trim23Q8BGX0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trim23Q8BGX0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trim23Q8BGX0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.04■■□□□ 1.6
Trim23Q8BGX0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trim23Q8BGX0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Trim23Q8BGX0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25■■□□□ 1.59
Trim23Q8BGX0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Trim23Q8BGX0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim23Q8BGX0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Trim23Q8BGX0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trim23Q8BGX0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.98■■□□□ 1.59
Trim23Q8BGX0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim23Q8BGX0 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.96■■□□□ 1.59
Trim23Q8BGX0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Trim23Q8BGX0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Trim23Q8BGX0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim23Q8BGX0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Trim23Q8BGX0 Zfp131-205ENSMUST00000223812 663 ntBASIC24.92■■□□□ 1.58
Trim23Q8BGX0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trim23Q8BGX0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.91■■□□□ 1.58
Trim23Q8BGX0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Trim23Q8BGX0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.91■■□□□ 1.58
Trim23Q8BGX0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trim23Q8BGX0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.57
Trim23Q8BGX0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.88■■□□□ 1.57
Trim23Q8BGX0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim23Q8BGX0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
Trim23Q8BGX0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
Trim23Q8BGX0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim23Q8BGX0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim23Q8BGX0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim23Q8BGX0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim23Q8BGX0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Trim23Q8BGX0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim23Q8BGX0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Trim23Q8BGX0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim23Q8BGX0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim23Q8BGX0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim23Q8BGX0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim23Q8BGX0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim23Q8BGX0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Trim23Q8BGX0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.76■■□□□ 1.55
Trim23Q8BGX0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim23Q8BGX0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Trim23Q8BGX0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim23Q8BGX0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.74■■□□□ 1.55
Trim23Q8BGX0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Trim23Q8BGX0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim23Q8BGX0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim23Q8BGX0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Trim23Q8BGX0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.72■■□□□ 1.55
Trim23Q8BGX0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim23Q8BGX0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms