Protein–RNA interactions for Protein: Q6Q473

Clca4a, Calcium-activated chloride channel regulator 4A, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4aQ6Q473 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Clca4aQ6Q473 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Clca4aQ6Q473 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Clca4aQ6Q473 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.39■■■□□ 2.46
Clca4aQ6Q473 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Clca4aQ6Q473 Peli2-204ENSMUST00000226513 1320 ntBASIC30.34■■■□□ 2.45
Clca4aQ6Q473 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.32■■■□□ 2.44
Clca4aQ6Q473 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Clca4aQ6Q473 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Clca4aQ6Q473 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Clca4aQ6Q473 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Clca4aQ6Q473 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Clca4aQ6Q473 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Clca4aQ6Q473 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Clca4aQ6Q473 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Clca4aQ6Q473 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Clca4aQ6Q473 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Clca4aQ6Q473 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
Clca4aQ6Q473 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Clca4aQ6Q473 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Clca4aQ6Q473 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.42
Clca4aQ6Q473 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
Clca4aQ6Q473 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Clca4aQ6Q473 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
Clca4aQ6Q473 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.14■■■□□ 2.42
Clca4aQ6Q473 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.14■■■□□ 2.42
Clca4aQ6Q473 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Clca4aQ6Q473 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Clca4aQ6Q473 Gm16148-201ENSMUST00000119653 893 ntBASIC30.09■■■□□ 2.41
Clca4aQ6Q473 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Clca4aQ6Q473 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Clca4aQ6Q473 Zfp131-205ENSMUST00000223812 663 ntBASIC30.05■■■□□ 2.4
Clca4aQ6Q473 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Clca4aQ6Q473 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Clca4aQ6Q473 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Clca4aQ6Q473 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Clca4aQ6Q473 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Clca4aQ6Q473 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Clca4aQ6Q473 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Clca4aQ6Q473 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Clca4aQ6Q473 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Clca4aQ6Q473 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Clca4aQ6Q473 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
Clca4aQ6Q473 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Clca4aQ6Q473 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Clca4aQ6Q473 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Clca4aQ6Q473 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Clca4aQ6Q473 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.87■■■□□ 2.37
Clca4aQ6Q473 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.85■■■□□ 2.37
Clca4aQ6Q473 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Clca4aQ6Q473 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.83■■■□□ 2.37
Clca4aQ6Q473 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.82■■■□□ 2.36
Clca4aQ6Q473 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.82■■■□□ 2.36
Clca4aQ6Q473 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.8■■■□□ 2.36
Clca4aQ6Q473 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Clca4aQ6Q473 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Clca4aQ6Q473 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Clca4aQ6Q473 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Clca4aQ6Q473 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Clca4aQ6Q473 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Clca4aQ6Q473 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
Clca4aQ6Q473 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Clca4aQ6Q473 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Clca4aQ6Q473 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Clca4aQ6Q473 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Clca4aQ6Q473 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Clca4aQ6Q473 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Clca4aQ6Q473 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Clca4aQ6Q473 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.69■■■□□ 2.34
Clca4aQ6Q473 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Clca4aQ6Q473 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
Clca4aQ6Q473 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.65■■■□□ 2.34
Clca4aQ6Q473 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Clca4aQ6Q473 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.64■■■□□ 2.33
Clca4aQ6Q473 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.63■■■□□ 2.33
Clca4aQ6Q473 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.62■■■□□ 2.33
Clca4aQ6Q473 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Clca4aQ6Q473 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Clca4aQ6Q473 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
Clca4aQ6Q473 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Clca4aQ6Q473 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Clca4aQ6Q473 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.57■■■□□ 2.32
Clca4aQ6Q473 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.57■■■□□ 2.32
Clca4aQ6Q473 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.56■■■□□ 2.32
Clca4aQ6Q473 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Clca4aQ6Q473 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Clca4aQ6Q473 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.55■■■□□ 2.32
Clca4aQ6Q473 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.55■■■□□ 2.32
Clca4aQ6Q473 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Clca4aQ6Q473 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.5■■■□□ 2.31
Clca4aQ6Q473 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Clca4aQ6Q473 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Clca4aQ6Q473 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
Clca4aQ6Q473 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
Clca4aQ6Q473 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Clca4aQ6Q473 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
Clca4aQ6Q473 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Clca4aQ6Q473 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
Clca4aQ6Q473 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Clca4aQ6Q473 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms