Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cmc4Q61908 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cmc4Q61908 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cmc4Q61908 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.1■□□□□ 0.65
Cmc4Q61908 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.1■□□□□ 0.65
Cmc4Q61908 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cmc4Q61908 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Cmc4Q61908 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cmc4Q61908 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cmc4Q61908 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cmc4Q61908 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.03■□□□□ 0.64
Cmc4Q61908 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.03■□□□□ 0.64
Cmc4Q61908 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cmc4Q61908 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cmc4Q61908 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cmc4Q61908 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cmc4Q61908 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cmc4Q61908 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cmc4Q61908 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cmc4Q61908 Gm16148-201ENSMUST00000119653 893 ntBASIC18.98■□□□□ 0.63
Cmc4Q61908 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cmc4Q61908 Peli2-204ENSMUST00000226513 1320 ntBASIC18.98■□□□□ 0.63
Cmc4Q61908 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cmc4Q61908 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cmc4Q61908 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cmc4Q61908 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cmc4Q61908 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cmc4Q61908 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cmc4Q61908 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cmc4Q61908 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cmc4Q61908 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cmc4Q61908 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cmc4Q61908 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cmc4Q61908 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cmc4Q61908 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cmc4Q61908 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cmc4Q61908 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cmc4Q61908 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cmc4Q61908 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.86■□□□□ 0.61
Cmc4Q61908 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cmc4Q61908 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cmc4Q61908 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cmc4Q61908 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cmc4Q61908 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cmc4Q61908 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Cmc4Q61908 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cmc4Q61908 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmc4Q61908 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmc4Q61908 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmc4Q61908 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cmc4Q61908 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cmc4Q61908 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.81■□□□□ 0.6
Cmc4Q61908 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.8■□□□□ 0.6
Cmc4Q61908 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cmc4Q61908 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.78■□□□□ 0.6
Cmc4Q61908 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cmc4Q61908 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cmc4Q61908 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cmc4Q61908 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cmc4Q61908 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cmc4Q61908 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cmc4Q61908 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cmc4Q61908 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cmc4Q61908 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cmc4Q61908 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cmc4Q61908 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.73■□□□□ 0.59
Cmc4Q61908 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cmc4Q61908 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cmc4Q61908 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cmc4Q61908 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cmc4Q61908 Zfp131-205ENSMUST00000223812 663 ntBASIC18.67■□□□□ 0.58
Cmc4Q61908 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cmc4Q61908 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cmc4Q61908 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cmc4Q61908 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Cmc4Q61908 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.65■□□□□ 0.58
Cmc4Q61908 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cmc4Q61908 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cmc4Q61908 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cmc4Q61908 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cmc4Q61908 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.64■□□□□ 0.57
Cmc4Q61908 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.63■□□□□ 0.57
Cmc4Q61908 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.62■□□□□ 0.57
Cmc4Q61908 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cmc4Q61908 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmc4Q61908 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmc4Q61908 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmc4Q61908 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cmc4Q61908 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Cmc4Q61908 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Cmc4Q61908 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cmc4Q61908 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.59■□□□□ 0.57
Cmc4Q61908 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cmc4Q61908 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.58■□□□□ 0.56
Cmc4Q61908 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.58■□□□□ 0.56
Cmc4Q61908 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmc4Q61908 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cmc4Q61908 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cmc4Q61908 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cmc4Q61908 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms