Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
Scnn1aQ61180 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Scnn1aQ61180 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Scnn1aQ61180 Gm16148-201ENSMUST00000119653 893 ntBASIC30.97■■■□□ 2.55
Scnn1aQ61180 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Scnn1aQ61180 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Scnn1aQ61180 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Scnn1aQ61180 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Scnn1aQ61180 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Scnn1aQ61180 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.9■■■□□ 2.54
Scnn1aQ61180 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Scnn1aQ61180 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Scnn1aQ61180 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Scnn1aQ61180 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Scnn1aQ61180 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Scnn1aQ61180 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Scnn1aQ61180 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Scnn1aQ61180 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Scnn1aQ61180 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Scnn1aQ61180 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.79■■■□□ 2.52
Scnn1aQ61180 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Scnn1aQ61180 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Scnn1aQ61180 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.74■■■□□ 2.51
Scnn1aQ61180 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.73■■■□□ 2.51
Scnn1aQ61180 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.72■■■□□ 2.51
Scnn1aQ61180 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Scnn1aQ61180 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Scnn1aQ61180 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.64■■■□□ 2.5
Scnn1aQ61180 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
Scnn1aQ61180 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Scnn1aQ61180 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Scnn1aQ61180 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Scnn1aQ61180 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
Scnn1aQ61180 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Scnn1aQ61180 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Scnn1aQ61180 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Scnn1aQ61180 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Scnn1aQ61180 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Scnn1aQ61180 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Scnn1aQ61180 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.55■■■□□ 2.48
Scnn1aQ61180 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Scnn1aQ61180 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
Scnn1aQ61180 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Scnn1aQ61180 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.49■■■□□ 2.47
Scnn1aQ61180 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
Scnn1aQ61180 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.47■■■□□ 2.47
Scnn1aQ61180 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
Scnn1aQ61180 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.4■■■□□ 2.46
Scnn1aQ61180 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Scnn1aQ61180 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
Scnn1aQ61180 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Scnn1aQ61180 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Scnn1aQ61180 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.36■■■□□ 2.45
Scnn1aQ61180 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Scnn1aQ61180 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
Scnn1aQ61180 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Scnn1aQ61180 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Scnn1aQ61180 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Scnn1aQ61180 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Scnn1aQ61180 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Scnn1aQ61180 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Scnn1aQ61180 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.3■■■□□ 2.44
Scnn1aQ61180 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Scnn1aQ61180 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Scnn1aQ61180 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Scnn1aQ61180 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Scnn1aQ61180 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Scnn1aQ61180 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Scnn1aQ61180 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.25■■■□□ 2.43
Scnn1aQ61180 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Scnn1aQ61180 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Scnn1aQ61180 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Scnn1aQ61180 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Scnn1aQ61180 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Scnn1aQ61180 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Scnn1aQ61180 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Scnn1aQ61180 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Scnn1aQ61180 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.17■■■□□ 2.42
Scnn1aQ61180 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Scnn1aQ61180 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
Scnn1aQ61180 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Scnn1aQ61180 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Scnn1aQ61180 Gm45855-201ENSMUST00000212546 880 ntBASIC30.14■■■□□ 2.42
Scnn1aQ61180 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.14■■■□□ 2.42
Scnn1aQ61180 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Scnn1aQ61180 Gm9397-201ENSMUST00000200125 605 ntBASIC30.11■■■□□ 2.41
Scnn1aQ61180 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Scnn1aQ61180 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Scnn1aQ61180 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Scnn1aQ61180 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.09■■■□□ 2.41
Scnn1aQ61180 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Scnn1aQ61180 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Scnn1aQ61180 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.04■■■□□ 2.4
Scnn1aQ61180 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Scnn1aQ61180 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Scnn1aQ61180 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Scnn1aQ61180 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.02■■■□□ 2.4
Scnn1aQ61180 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.02■■■□□ 2.4
Scnn1aQ61180 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.02■■■□□ 2.4
Scnn1aQ61180 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.01■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms