Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.55■■■□□ 2
Col12a1Q60847 Peli2-204ENSMUST00000226513 1320 ntBASIC27.55■■■□□ 2
Col12a1Q60847 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.54■■■□□ 2
Col12a1Q60847 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Col12a1Q60847 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.52■■■□□ 2
Col12a1Q60847 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Col12a1Q60847 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col12a1Q60847 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Col12a1Q60847 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col12a1Q60847 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.5■■□□□ 1.99
Col12a1Q60847 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Col12a1Q60847 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Col12a1Q60847 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Col12a1Q60847 Gm9397-201ENSMUST00000200125 605 ntBASIC27.45■■□□□ 1.99
Col12a1Q60847 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Col12a1Q60847 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.44■■□□□ 1.98
Col12a1Q60847 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Col12a1Q60847 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col12a1Q60847 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col12a1Q60847 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Col12a1Q60847 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Col12a1Q60847 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Col12a1Q60847 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col12a1Q60847 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Col12a1Q60847 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Col12a1Q60847 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.35■■□□□ 1.97
Col12a1Q60847 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Col12a1Q60847 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col12a1Q60847 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.3■■□□□ 1.96
Col12a1Q60847 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col12a1Q60847 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.3■■□□□ 1.96
Col12a1Q60847 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.29■■□□□ 1.96
Col12a1Q60847 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col12a1Q60847 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.27■■□□□ 1.96
Col12a1Q60847 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Col12a1Q60847 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
Col12a1Q60847 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.21■■□□□ 1.95
Col12a1Q60847 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col12a1Q60847 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.16■■□□□ 1.94
Col12a1Q60847 Gm8503-201ENSMUST00000118131 455 ntBASIC27.16■■□□□ 1.94
Col12a1Q60847 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Col12a1Q60847 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Col12a1Q60847 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.13■■□□□ 1.93
Col12a1Q60847 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.11■■□□□ 1.93
Col12a1Q60847 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.07■■□□□ 1.92
Col12a1Q60847 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Col12a1Q60847 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Col12a1Q60847 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Col12a1Q60847 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col12a1Q60847 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.01■■□□□ 1.91
Col12a1Q60847 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.01■■□□□ 1.91
Col12a1Q60847 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27■■□□□ 1.91
Col12a1Q60847 Gm24970-201ENSMUST00000175582 82 ntBASIC27■■□□□ 1.91
Col12a1Q60847 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col12a1Q60847 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Col12a1Q60847 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col12a1Q60847 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Col12a1Q60847 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col12a1Q60847 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col12a1Q60847 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.92■■□□□ 1.9
Col12a1Q60847 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col12a1Q60847 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col12a1Q60847 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Col12a1Q60847 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Col12a1Q60847 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Col12a1Q60847 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.88■■□□□ 1.89
Col12a1Q60847 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Col12a1Q60847 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Col12a1Q60847 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.83■■□□□ 1.89
Col12a1Q60847 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Col12a1Q60847 Gm6821-201ENSMUST00000107540 542 ntBASIC26.77■■□□□ 1.88
Col12a1Q60847 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
Col12a1Q60847 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Col12a1Q60847 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.73■■□□□ 1.87
Col12a1Q60847 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Col12a1Q60847 Mipep-204ENSMUST00000225043 1548 ntBASIC26.71■■□□□ 1.87
Col12a1Q60847 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
Col12a1Q60847 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
Col12a1Q60847 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Col12a1Q60847 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col12a1Q60847 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col12a1Q60847 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Col12a1Q60847 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.61■■□□□ 1.85
Col12a1Q60847 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col12a1Q60847 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col12a1Q60847 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Col12a1Q60847 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col12a1Q60847 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Col12a1Q60847 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.51■■□□□ 1.83
Col12a1Q60847 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.49■■□□□ 1.83
Col12a1Q60847 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Col12a1Q60847 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Col12a1Q60847 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Col12a1Q60847 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
Col12a1Q60847 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Col12a1Q60847 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Col12a1Q60847 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.42■■□□□ 1.82
Col12a1Q60847 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Col12a1Q60847 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Col12a1Q60847 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms