Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.2■□□□□ 0.82
Trp53rkaQ5U452 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trp53rkaQ5U452 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trp53rkaQ5U452 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trp53rkaQ5U452 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trp53rkaQ5U452 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.16■□□□□ 0.82
Trp53rkaQ5U452 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trp53rkaQ5U452 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trp53rkaQ5U452 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trp53rkaQ5U452 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trp53rkaQ5U452 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Trp53rkaQ5U452 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trp53rkaQ5U452 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trp53rkaQ5U452 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Trp53rkaQ5U452 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trp53rkaQ5U452 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trp53rkaQ5U452 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trp53rkaQ5U452 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trp53rkaQ5U452 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trp53rkaQ5U452 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trp53rkaQ5U452 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trp53rkaQ5U452 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trp53rkaQ5U452 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.07■□□□□ 0.8
Trp53rkaQ5U452 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trp53rkaQ5U452 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trp53rkaQ5U452 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trp53rkaQ5U452 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Trp53rkaQ5U452 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trp53rkaQ5U452 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trp53rkaQ5U452 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trp53rkaQ5U452 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trp53rkaQ5U452 Gm25238-201ENSMUST00000174914 89 ntBASIC19.98■□□□□ 0.79
Trp53rkaQ5U452 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trp53rkaQ5U452 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trp53rkaQ5U452 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trp53rkaQ5U452 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trp53rkaQ5U452 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trp53rkaQ5U452 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.95■□□□□ 0.78
Trp53rkaQ5U452 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trp53rkaQ5U452 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trp53rkaQ5U452 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trp53rkaQ5U452 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trp53rkaQ5U452 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trp53rkaQ5U452 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trp53rkaQ5U452 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trp53rkaQ5U452 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trp53rkaQ5U452 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trp53rkaQ5U452 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trp53rkaQ5U452 Gm27325-201ENSMUST00000175467 74 ntBASIC19.91■□□□□ 0.78
Trp53rkaQ5U452 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trp53rkaQ5U452 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trp53rkaQ5U452 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trp53rkaQ5U452 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trp53rkaQ5U452 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trp53rkaQ5U452 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.88■□□□□ 0.77
Trp53rkaQ5U452 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trp53rkaQ5U452 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trp53rkaQ5U452 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trp53rkaQ5U452 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trp53rkaQ5U452 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Amer2-203ENSMUST00000225247 2662 ntBASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trp53rkaQ5U452 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trp53rkaQ5U452 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.82■□□□□ 0.76
Trp53rkaQ5U452 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trp53rkaQ5U452 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.81■□□□□ 0.76
Trp53rkaQ5U452 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trp53rkaQ5U452 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trp53rkaQ5U452 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trp53rkaQ5U452 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trp53rkaQ5U452 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trp53rkaQ5U452 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trp53rkaQ5U452 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trp53rkaQ5U452 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trp53rkaQ5U452 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Trp53rkaQ5U452 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trp53rkaQ5U452 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trp53rkaQ5U452 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trp53rkaQ5U452 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trp53rkaQ5U452 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trp53rkaQ5U452 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Trp53rkaQ5U452 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.72■□□□□ 0.75
Trp53rkaQ5U452 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trp53rkaQ5U452 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trp53rkaQ5U452 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trp53rkaQ5U452 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms