Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.2■□□□□ 0.82
Trp53rkaQ5U452 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trp53rkaQ5U452 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trp53rkaQ5U452 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trp53rkaQ5U452 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trp53rkaQ5U452 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.16■□□□□ 0.82
Trp53rkaQ5U452 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trp53rkaQ5U452 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trp53rkaQ5U452 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trp53rkaQ5U452 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trp53rkaQ5U452 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Trp53rkaQ5U452 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trp53rkaQ5U452 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trp53rkaQ5U452 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Trp53rkaQ5U452 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trp53rkaQ5U452 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trp53rkaQ5U452 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trp53rkaQ5U452 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trp53rkaQ5U452 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trp53rkaQ5U452 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trp53rkaQ5U452 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trp53rkaQ5U452 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trp53rkaQ5U452 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.07■□□□□ 0.8
Trp53rkaQ5U452 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trp53rkaQ5U452 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trp53rkaQ5U452 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trp53rkaQ5U452 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trp53rkaQ5U452 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Trp53rkaQ5U452 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trp53rkaQ5U452 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trp53rkaQ5U452 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trp53rkaQ5U452 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trp53rkaQ5U452 Gm25238-201ENSMUST00000174914 89 ntBASIC19.98■□□□□ 0.79
Trp53rkaQ5U452 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trp53rkaQ5U452 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trp53rkaQ5U452 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trp53rkaQ5U452 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trp53rkaQ5U452 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trp53rkaQ5U452 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.95■□□□□ 0.78
Trp53rkaQ5U452 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trp53rkaQ5U452 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trp53rkaQ5U452 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trp53rkaQ5U452 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trp53rkaQ5U452 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trp53rkaQ5U452 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trp53rkaQ5U452 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trp53rkaQ5U452 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trp53rkaQ5U452 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trp53rkaQ5U452 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trp53rkaQ5U452 Gm27325-201ENSMUST00000175467 74 ntBASIC19.91■□□□□ 0.78
Trp53rkaQ5U452 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trp53rkaQ5U452 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trp53rkaQ5U452 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trp53rkaQ5U452 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trp53rkaQ5U452 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trp53rkaQ5U452 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.88■□□□□ 0.77
Trp53rkaQ5U452 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trp53rkaQ5U452 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trp53rkaQ5U452 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trp53rkaQ5U452 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trp53rkaQ5U452 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Amer2-203ENSMUST00000225247 2662 ntBASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trp53rkaQ5U452 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trp53rkaQ5U452 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trp53rkaQ5U452 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.82■□□□□ 0.76
Trp53rkaQ5U452 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trp53rkaQ5U452 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.81■□□□□ 0.76
Trp53rkaQ5U452 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trp53rkaQ5U452 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trp53rkaQ5U452 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trp53rkaQ5U452 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trp53rkaQ5U452 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trp53rkaQ5U452 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trp53rkaQ5U452 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trp53rkaQ5U452 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trp53rkaQ5U452 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Trp53rkaQ5U452 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trp53rkaQ5U452 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trp53rkaQ5U452 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trp53rkaQ5U452 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trp53rkaQ5U452 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trp53rkaQ5U452 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trp53rkaQ5U452 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Trp53rkaQ5U452 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.72■□□□□ 0.75
Trp53rkaQ5U452 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trp53rkaQ5U452 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trp53rkaQ5U452 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trp53rkaQ5U452 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms