Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Col27a1Q5QNQ9 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.12■■□□□ 1.93
Col27a1Q5QNQ9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col27a1Q5QNQ9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Col27a1Q5QNQ9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Col27a1Q5QNQ9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col27a1Q5QNQ9 Gm9397-201ENSMUST00000200125 605 ntBASIC27.06■■□□□ 1.92
Col27a1Q5QNQ9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Col27a1Q5QNQ9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Col27a1Q5QNQ9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.02■■□□□ 1.92
Col27a1Q5QNQ9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Col27a1Q5QNQ9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Col27a1Q5QNQ9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.98■■□□□ 1.91
Col27a1Q5QNQ9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Col27a1Q5QNQ9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.96■■□□□ 1.91
Col27a1Q5QNQ9 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.96■■□□□ 1.91
Col27a1Q5QNQ9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.95■■□□□ 1.9
Col27a1Q5QNQ9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col27a1Q5QNQ9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Col27a1Q5QNQ9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col27a1Q5QNQ9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col27a1Q5QNQ9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
Col27a1Q5QNQ9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.9■■□□□ 1.9
Col27a1Q5QNQ9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Col27a1Q5QNQ9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Col27a1Q5QNQ9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col27a1Q5QNQ9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Col27a1Q5QNQ9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Col27a1Q5QNQ9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Col27a1Q5QNQ9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Col27a1Q5QNQ9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Col27a1Q5QNQ9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Col27a1Q5QNQ9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Col27a1Q5QNQ9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.82■■□□□ 1.88
Col27a1Q5QNQ9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Col27a1Q5QNQ9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Col27a1Q5QNQ9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.79■■□□□ 1.88
Col27a1Q5QNQ9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col27a1Q5QNQ9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col27a1Q5QNQ9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.78■■□□□ 1.88
Col27a1Q5QNQ9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.78■■□□□ 1.88
Col27a1Q5QNQ9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col27a1Q5QNQ9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.74■■□□□ 1.87
Col27a1Q5QNQ9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.74■■□□□ 1.87
Col27a1Q5QNQ9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Col27a1Q5QNQ9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Col27a1Q5QNQ9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col27a1Q5QNQ9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Col27a1Q5QNQ9 Mipep-204ENSMUST00000225043 1548 ntBASIC26.64■■□□□ 1.85
Col27a1Q5QNQ9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col27a1Q5QNQ9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.61■■□□□ 1.85
Col27a1Q5QNQ9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.61■■□□□ 1.85
Col27a1Q5QNQ9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col27a1Q5QNQ9 Gm24970-201ENSMUST00000175582 82 ntBASIC26.58■■□□□ 1.85
Col27a1Q5QNQ9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col27a1Q5QNQ9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col27a1Q5QNQ9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.58■■□□□ 1.84
Col27a1Q5QNQ9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.57■■□□□ 1.84
Col27a1Q5QNQ9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col27a1Q5QNQ9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.56■■□□□ 1.84
Col27a1Q5QNQ9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col27a1Q5QNQ9 Gm8503-201ENSMUST00000118131 455 ntBASIC26.55■■□□□ 1.84
Col27a1Q5QNQ9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col27a1Q5QNQ9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Col27a1Q5QNQ9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.53■■□□□ 1.84
Col27a1Q5QNQ9 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.52■■□□□ 1.84
Col27a1Q5QNQ9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
Col27a1Q5QNQ9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Col27a1Q5QNQ9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Col27a1Q5QNQ9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col27a1Q5QNQ9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.43■■□□□ 1.82
Col27a1Q5QNQ9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Col27a1Q5QNQ9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Col27a1Q5QNQ9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col27a1Q5QNQ9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col27a1Q5QNQ9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col27a1Q5QNQ9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Col27a1Q5QNQ9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.3■■□□□ 1.8
Col27a1Q5QNQ9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col27a1Q5QNQ9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
Col27a1Q5QNQ9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col27a1Q5QNQ9 Gm6821-201ENSMUST00000107540 542 ntBASIC26.26■■□□□ 1.79
Col27a1Q5QNQ9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Col27a1Q5QNQ9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Col27a1Q5QNQ9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Col27a1Q5QNQ9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col27a1Q5QNQ9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.13■■□□□ 1.77
Col27a1Q5QNQ9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col27a1Q5QNQ9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.1■■□□□ 1.77
Col27a1Q5QNQ9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col27a1Q5QNQ9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.09■■□□□ 1.77
Col27a1Q5QNQ9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Col27a1Q5QNQ9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Col27a1Q5QNQ9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.07■■□□□ 1.76
Col27a1Q5QNQ9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Col27a1Q5QNQ9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col27a1Q5QNQ9 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.04■■□□□ 1.76
Col27a1Q5QNQ9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
Col27a1Q5QNQ9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col27a1Q5QNQ9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms