Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.54■■■□□ 2
Vps13aQ5H8C4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.53■■■□□ 2
Vps13aQ5H8C4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.52■■■□□ 2
Vps13aQ5H8C4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Vps13aQ5H8C4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Vps13aQ5H8C4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Vps13aQ5H8C4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Vps13aQ5H8C4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.48■■□□□ 1.99
Vps13aQ5H8C4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Vps13aQ5H8C4 Peli2-204ENSMUST00000226513 1320 ntBASIC27.45■■□□□ 1.98
Vps13aQ5H8C4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Vps13aQ5H8C4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Vps13aQ5H8C4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Vps13aQ5H8C4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Vps13aQ5H8C4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
Vps13aQ5H8C4 Gm9397-201ENSMUST00000200125 605 ntBASIC27.42■■□□□ 1.98
Vps13aQ5H8C4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Vps13aQ5H8C4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Vps13aQ5H8C4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Vps13aQ5H8C4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Vps13aQ5H8C4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Vps13aQ5H8C4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Vps13aQ5H8C4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Vps13aQ5H8C4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Vps13aQ5H8C4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Vps13aQ5H8C4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.28■■□□□ 1.96
Vps13aQ5H8C4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Vps13aQ5H8C4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.25■■□□□ 1.95
Vps13aQ5H8C4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.25■■□□□ 1.95
Vps13aQ5H8C4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Vps13aQ5H8C4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
Vps13aQ5H8C4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.25■■□□□ 1.95
Vps13aQ5H8C4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Vps13aQ5H8C4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Vps13aQ5H8C4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
Vps13aQ5H8C4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Vps13aQ5H8C4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.17■■□□□ 1.94
Vps13aQ5H8C4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Vps13aQ5H8C4 Gm8503-201ENSMUST00000118131 455 ntBASIC27.15■■□□□ 1.94
Vps13aQ5H8C4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Vps13aQ5H8C4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Vps13aQ5H8C4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.11■■□□□ 1.93
Vps13aQ5H8C4 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.08■■□□□ 1.93
Vps13aQ5H8C4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.08■■□□□ 1.93
Vps13aQ5H8C4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.06■■□□□ 1.92
Vps13aQ5H8C4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Vps13aQ5H8C4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Vps13aQ5H8C4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Vps13aQ5H8C4 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.98■■□□□ 1.91
Vps13aQ5H8C4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Vps13aQ5H8C4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.97■■□□□ 1.91
Vps13aQ5H8C4 Gm24970-201ENSMUST00000175582 82 ntBASIC26.95■■□□□ 1.91
Vps13aQ5H8C4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vps13aQ5H8C4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Vps13aQ5H8C4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Vps13aQ5H8C4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Vps13aQ5H8C4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Vps13aQ5H8C4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.88■■□□□ 1.89
Vps13aQ5H8C4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Vps13aQ5H8C4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Vps13aQ5H8C4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Vps13aQ5H8C4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Vps13aQ5H8C4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Vps13aQ5H8C4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.84■■□□□ 1.89
Vps13aQ5H8C4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Vps13aQ5H8C4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Vps13aQ5H8C4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.83■■□□□ 1.88
Vps13aQ5H8C4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Vps13aQ5H8C4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Vps13aQ5H8C4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Vps13aQ5H8C4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Vps13aQ5H8C4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Vps13aQ5H8C4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Vps13aQ5H8C4 Gm6821-201ENSMUST00000107540 542 ntBASIC26.75■■□□□ 1.87
Vps13aQ5H8C4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Vps13aQ5H8C4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Vps13aQ5H8C4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Vps13aQ5H8C4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Vps13aQ5H8C4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Vps13aQ5H8C4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.65■■□□□ 1.86
Vps13aQ5H8C4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Vps13aQ5H8C4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.63■■□□□ 1.85
Vps13aQ5H8C4 Mipep-204ENSMUST00000225043 1548 ntBASIC26.61■■□□□ 1.85
Vps13aQ5H8C4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vps13aQ5H8C4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Vps13aQ5H8C4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Vps13aQ5H8C4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Vps13aQ5H8C4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Vps13aQ5H8C4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Vps13aQ5H8C4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Vps13aQ5H8C4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Vps13aQ5H8C4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.47■■□□□ 1.83
Vps13aQ5H8C4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Vps13aQ5H8C4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Vps13aQ5H8C4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.44■■□□□ 1.82
Vps13aQ5H8C4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Vps13aQ5H8C4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.43■■□□□ 1.82
Vps13aQ5H8C4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Vps13aQ5H8C4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Vps13aQ5H8C4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms