Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
Trpm1Q2TV84 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
Trpm1Q2TV84 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
Trpm1Q2TV84 Gm45855-201ENSMUST00000212546 880 ntBASIC39.62■■■■□ 3.93
Trpm1Q2TV84 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC39.61■■■■□ 3.93
Trpm1Q2TV84 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC39.6■■■■□ 3.93
Trpm1Q2TV84 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
Trpm1Q2TV84 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC39.57■■■■□ 3.92
Trpm1Q2TV84 Gm9397-201ENSMUST00000200125 605 ntBASIC39.52■■■■□ 3.92
Trpm1Q2TV84 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.91
Trpm1Q2TV84 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC39.51■■■■□ 3.91
Trpm1Q2TV84 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
Trpm1Q2TV84 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
Trpm1Q2TV84 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC39.38■■■■□ 3.89
Trpm1Q2TV84 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC39.37■■■■□ 3.89
Trpm1Q2TV84 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC39.37■■■■□ 3.89
Trpm1Q2TV84 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
Trpm1Q2TV84 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC39.33■■■■□ 3.89
Trpm1Q2TV84 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
Trpm1Q2TV84 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC39.32■■■■□ 3.89
Trpm1Q2TV84 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC39.32■■■■□ 3.88
Trpm1Q2TV84 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
Trpm1Q2TV84 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
Trpm1Q2TV84 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
Trpm1Q2TV84 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
Trpm1Q2TV84 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
Trpm1Q2TV84 Mipep-204ENSMUST00000225043 1548 ntBASIC39.29■■■■□ 3.88
Trpm1Q2TV84 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
Trpm1Q2TV84 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Trpm1Q2TV84 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC39.23■■■■□ 3.87
Trpm1Q2TV84 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC39.22■■■■□ 3.87
Trpm1Q2TV84 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Trpm1Q2TV84 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC39.19■■■■□ 3.86
Trpm1Q2TV84 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
Trpm1Q2TV84 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
Trpm1Q2TV84 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC39.16■■■■□ 3.86
Trpm1Q2TV84 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
Trpm1Q2TV84 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
Trpm1Q2TV84 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC39.12■■■■□ 3.85
Trpm1Q2TV84 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC39.12■■■■□ 3.85
Trpm1Q2TV84 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
Trpm1Q2TV84 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Trpm1Q2TV84 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC39.11■■■■□ 3.85
Trpm1Q2TV84 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC39.09■■■■□ 3.85
Trpm1Q2TV84 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC39.07■■■■□ 3.85
Trpm1Q2TV84 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC39.07■■■■□ 3.85
Trpm1Q2TV84 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
Trpm1Q2TV84 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC39.04■■■■□ 3.84
Trpm1Q2TV84 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
Trpm1Q2TV84 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
Trpm1Q2TV84 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC38.96■■■■□ 3.83
Trpm1Q2TV84 Gm5987-201ENSMUST00000196433 1151 ntBASIC38.94■■■■□ 3.82
Trpm1Q2TV84 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
Trpm1Q2TV84 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC38.9■■■■□ 3.82
Trpm1Q2TV84 Gm24970-201ENSMUST00000175582 82 ntBASIC38.9■■■■□ 3.82
Trpm1Q2TV84 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
Trpm1Q2TV84 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC38.89■■■■□ 3.82
Trpm1Q2TV84 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC38.87■■■■□ 3.81
Trpm1Q2TV84 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC38.86■■■■□ 3.81
Trpm1Q2TV84 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
Trpm1Q2TV84 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Trpm1Q2TV84 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
Trpm1Q2TV84 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC38.81■■■■□ 3.8
Trpm1Q2TV84 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC38.81■■■■□ 3.8
Trpm1Q2TV84 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC38.8■■■■□ 3.8
Trpm1Q2TV84 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
Trpm1Q2TV84 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Trpm1Q2TV84 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC38.77■■■■□ 3.8
Trpm1Q2TV84 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
Trpm1Q2TV84 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
Trpm1Q2TV84 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
Trpm1Q2TV84 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC38.63■■■■□ 3.77
Trpm1Q2TV84 Gm8503-201ENSMUST00000118131 455 ntBASIC38.62■■■■□ 3.77
Trpm1Q2TV84 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
Trpm1Q2TV84 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
Trpm1Q2TV84 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC38.54■■■■□ 3.76
Trpm1Q2TV84 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC38.53■■■■□ 3.76
Trpm1Q2TV84 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Trpm1Q2TV84 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC38.51■■■■□ 3.76
Trpm1Q2TV84 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC38.48■■■■□ 3.75
Trpm1Q2TV84 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC38.48■■■■□ 3.75
Trpm1Q2TV84 Gm9939-201ENSMUST00000067161 1154 ntBASIC38.47■■■■□ 3.75
Trpm1Q2TV84 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC38.46■■■■□ 3.75
Trpm1Q2TV84 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC38.41■■■■□ 3.74
Trpm1Q2TV84 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Trpm1Q2TV84 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC38.4■■■■□ 3.74
Trpm1Q2TV84 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC38.38■■■■□ 3.74
Trpm1Q2TV84 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC38.38■■■■□ 3.73
Trpm1Q2TV84 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
Trpm1Q2TV84 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
Trpm1Q2TV84 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Trpm1Q2TV84 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC38.34■■■■□ 3.73
Trpm1Q2TV84 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
Trpm1Q2TV84 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC38.31■■■■□ 3.72
Trpm1Q2TV84 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Trpm1Q2TV84 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC38.28■■■■□ 3.72
Trpm1Q2TV84 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Trpm1Q2TV84 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
Trpm1Q2TV84 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC38.27■■■■□ 3.72
Trpm1Q2TV84 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC38.26■■■■□ 3.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms