Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpl35aO55142 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl35aO55142 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl35aO55142 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl35aO55142 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl35aO55142 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rpl35aO55142 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpl35aO55142 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.27■□□□□ 0.68
Rpl35aO55142 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.26■□□□□ 0.67
Rpl35aO55142 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl35aO55142 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl35aO55142 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl35aO55142 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl35aO55142 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl35aO55142 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl35aO55142 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rpl35aO55142 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rpl35aO55142 Peli2-204ENSMUST00000226513 1320 ntBASIC19.2■□□□□ 0.66
Rpl35aO55142 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl35aO55142 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl35aO55142 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl35aO55142 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rpl35aO55142 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl35aO55142 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rpl35aO55142 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl35aO55142 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.14■□□□□ 0.65
Rpl35aO55142 Gm16148-201ENSMUST00000119653 893 ntBASIC19.14■□□□□ 0.65
Rpl35aO55142 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl35aO55142 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rpl35aO55142 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rpl35aO55142 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl35aO55142 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Rpl35aO55142 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpl35aO55142 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.1■□□□□ 0.65
Rpl35aO55142 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rpl35aO55142 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.1■□□□□ 0.65
Rpl35aO55142 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpl35aO55142 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpl35aO55142 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpl35aO55142 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpl35aO55142 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpl35aO55142 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpl35aO55142 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpl35aO55142 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpl35aO55142 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rpl35aO55142 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpl35aO55142 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpl35aO55142 Zfp131-205ENSMUST00000223812 663 ntBASIC19■□□□□ 0.63
Rpl35aO55142 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpl35aO55142 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpl35aO55142 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpl35aO55142 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpl35aO55142 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Rpl35aO55142 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpl35aO55142 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpl35aO55142 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.95■□□□□ 0.62
Rpl35aO55142 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpl35aO55142 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.94■□□□□ 0.62
Rpl35aO55142 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpl35aO55142 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.93■□□□□ 0.62
Rpl35aO55142 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rpl35aO55142 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpl35aO55142 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpl35aO55142 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Rpl35aO55142 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.92■□□□□ 0.62
Rpl35aO55142 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl35aO55142 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl35aO55142 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl35aO55142 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl35aO55142 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl35aO55142 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl35aO55142 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl35aO55142 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rpl35aO55142 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl35aO55142 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rpl35aO55142 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl35aO55142 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl35aO55142 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl35aO55142 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl35aO55142 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.84■□□□□ 0.61
Rpl35aO55142 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl35aO55142 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rpl35aO55142 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.83■□□□□ 0.6
Rpl35aO55142 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpl35aO55142 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.83■□□□□ 0.6
Rpl35aO55142 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpl35aO55142 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpl35aO55142 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.82■□□□□ 0.6
Rpl35aO55142 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.82■□□□□ 0.6
Rpl35aO55142 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl35aO55142 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl35aO55142 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rpl35aO55142 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl35aO55142 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl35aO55142 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl35aO55142 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl35aO55142 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Rpl35aO55142 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.79■□□□□ 0.6
Rpl35aO55142 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpl35aO55142 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 153.7 ms