Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MsmbO08540 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
MsmbO08540 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
MsmbO08540 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.11■□□□□ 0.81
MsmbO08540 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MsmbO08540 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MsmbO08540 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.11■□□□□ 0.81
MsmbO08540 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MsmbO08540 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MsmbO08540 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MsmbO08540 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MsmbO08540 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MsmbO08540 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MsmbO08540 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MsmbO08540 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.04■□□□□ 0.8
MsmbO08540 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MsmbO08540 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MsmbO08540 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MsmbO08540 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MsmbO08540 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MsmbO08540 Peli2-204ENSMUST00000226513 1320 ntBASIC20.01■□□□□ 0.79
MsmbO08540 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20■□□□□ 0.79
MsmbO08540 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20■□□□□ 0.79
MsmbO08540 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MsmbO08540 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MsmbO08540 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MsmbO08540 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MsmbO08540 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MsmbO08540 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MsmbO08540 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.93■□□□□ 0.78
MsmbO08540 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MsmbO08540 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.92■□□□□ 0.78
MsmbO08540 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MsmbO08540 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MsmbO08540 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MsmbO08540 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MsmbO08540 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MsmbO08540 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.88■□□□□ 0.77
MsmbO08540 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MsmbO08540 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MsmbO08540 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MsmbO08540 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
MsmbO08540 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MsmbO08540 Gm16148-201ENSMUST00000119653 893 ntBASIC19.84■□□□□ 0.77
MsmbO08540 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MsmbO08540 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MsmbO08540 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MsmbO08540 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MsmbO08540 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MsmbO08540 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MsmbO08540 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MsmbO08540 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MsmbO08540 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MsmbO08540 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MsmbO08540 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MsmbO08540 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.77■□□□□ 0.76
MsmbO08540 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MsmbO08540 Zfp131-205ENSMUST00000223812 663 ntBASIC19.75■□□□□ 0.75
MsmbO08540 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MsmbO08540 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MsmbO08540 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MsmbO08540 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
MsmbO08540 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.72■□□□□ 0.75
MsmbO08540 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.72■□□□□ 0.75
MsmbO08540 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MsmbO08540 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MsmbO08540 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MsmbO08540 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MsmbO08540 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
MsmbO08540 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.68■□□□□ 0.74
MsmbO08540 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MsmbO08540 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MsmbO08540 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MsmbO08540 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MsmbO08540 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
MsmbO08540 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.63■□□□□ 0.73
MsmbO08540 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MsmbO08540 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MsmbO08540 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.62■□□□□ 0.73
MsmbO08540 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MsmbO08540 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.62■□□□□ 0.73
MsmbO08540 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
MsmbO08540 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MsmbO08540 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.61■□□□□ 0.73
MsmbO08540 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MsmbO08540 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
MsmbO08540 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
MsmbO08540 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MsmbO08540 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MsmbO08540 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
MsmbO08540 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MsmbO08540 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.57■□□□□ 0.72
MsmbO08540 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MsmbO08540 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MsmbO08540 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MsmbO08540 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MsmbO08540 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MsmbO08540 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MsmbO08540 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MsmbO08540 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms