Protein–RNA interactions for Protein: J3QQ23

Gm21310, Predicted gene, 21310, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21310J3QQ23 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm21310J3QQ23 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Gm21310J3QQ23 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Gm21310J3QQ23 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm21310J3QQ23 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm21310J3QQ23 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm21310J3QQ23 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm21310J3QQ23 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm21310J3QQ23 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm21310J3QQ23 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.41■□□□□ 0.86
Gm21310J3QQ23 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm21310J3QQ23 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.4■□□□□ 0.86
Gm21310J3QQ23 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm21310J3QQ23 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm21310J3QQ23 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm21310J3QQ23 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm21310J3QQ23 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Gm21310J3QQ23 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm21310J3QQ23 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm21310J3QQ23 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm21310J3QQ23 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm21310J3QQ23 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm21310J3QQ23 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm21310J3QQ23 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm21310J3QQ23 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Gm21310J3QQ23 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm21310J3QQ23 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
Gm21310J3QQ23 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Gm21310J3QQ23 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm21310J3QQ23 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm21310J3QQ23 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm21310J3QQ23 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm21310J3QQ23 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm21310J3QQ23 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm21310J3QQ23 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm21310J3QQ23 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm21310J3QQ23 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm21310J3QQ23 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gm21310J3QQ23 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm21310J3QQ23 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm21310J3QQ23 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.23■□□□□ 0.83
Gm21310J3QQ23 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm21310J3QQ23 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm21310J3QQ23 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm21310J3QQ23 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm21310J3QQ23 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm21310J3QQ23 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Gm21310J3QQ23 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm21310J3QQ23 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Gm21310J3QQ23 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm21310J3QQ23 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Gm21310J3QQ23 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm21310J3QQ23 Amer2-203ENSMUST00000225247 2662 ntBASIC20.12■□□□□ 0.81
Gm21310J3QQ23 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Gm21310J3QQ23 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm21310J3QQ23 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm21310J3QQ23 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm21310J3QQ23 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Gm21310J3QQ23 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.09■□□□□ 0.81
Gm21310J3QQ23 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm21310J3QQ23 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm21310J3QQ23 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm21310J3QQ23 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Gm21310J3QQ23 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm21310J3QQ23 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm21310J3QQ23 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.07■□□□□ 0.8
Gm21310J3QQ23 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm21310J3QQ23 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm21310J3QQ23 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm21310J3QQ23 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm21310J3QQ23 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm21310J3QQ23 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Gm21310J3QQ23 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm21310J3QQ23 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm21310J3QQ23 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm21310J3QQ23 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20■□□□□ 0.79
Gm21310J3QQ23 Gm25238-201ENSMUST00000174914 89 ntBASIC20■□□□□ 0.79
Gm21310J3QQ23 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm21310J3QQ23 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20■□□□□ 0.79
Gm21310J3QQ23 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Gm21310J3QQ23 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.99■□□□□ 0.79
Gm21310J3QQ23 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm21310J3QQ23 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm21310J3QQ23 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm21310J3QQ23 Mipep-204ENSMUST00000225043 1548 ntBASIC19.96■□□□□ 0.79
Gm21310J3QQ23 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm21310J3QQ23 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.94■□□□□ 0.78
Gm21310J3QQ23 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm21310J3QQ23 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Gm21310J3QQ23 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm21310J3QQ23 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.92■□□□□ 0.78
Gm21310J3QQ23 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.92■□□□□ 0.78
Gm21310J3QQ23 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm21310J3QQ23 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm21310J3QQ23 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.91■□□□□ 0.78
Gm21310J3QQ23 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm21310J3QQ23 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.91■□□□□ 0.78
Gm21310J3QQ23 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm21310J3QQ23 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm21310J3QQ23 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms