Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm10553J3QPF1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Gm10553J3QPF1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm10553J3QPF1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm10553J3QPF1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Gm10553J3QPF1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm10553J3QPF1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm10553J3QPF1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm10553J3QPF1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm10553J3QPF1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Gm10553J3QPF1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm10553J3QPF1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.97■□□□□ 0.79
Gm10553J3QPF1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm10553J3QPF1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm10553J3QPF1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm10553J3QPF1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10553J3QPF1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm10553J3QPF1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm10553J3QPF1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.91■□□□□ 0.78
Gm10553J3QPF1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm10553J3QPF1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm10553J3QPF1 Peli2-204ENSMUST00000226513 1320 ntBASIC19.89■□□□□ 0.77
Gm10553J3QPF1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm10553J3QPF1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm10553J3QPF1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm10553J3QPF1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm10553J3QPF1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm10553J3QPF1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.84■□□□□ 0.77
Gm10553J3QPF1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Gm10553J3QPF1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm10553J3QPF1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm10553J3QPF1 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.83■□□□□ 0.76
Gm10553J3QPF1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.81■□□□□ 0.76
Gm10553J3QPF1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10553J3QPF1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm10553J3QPF1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Gm10553J3QPF1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Gm10553J3QPF1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm10553J3QPF1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Gm10553J3QPF1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm10553J3QPF1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm10553J3QPF1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm10553J3QPF1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm10553J3QPF1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm10553J3QPF1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm10553J3QPF1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm10553J3QPF1 Gm16148-201ENSMUST00000119653 893 ntBASIC19.74■□□□□ 0.75
Gm10553J3QPF1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Gm10553J3QPF1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm10553J3QPF1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm10553J3QPF1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm10553J3QPF1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm10553J3QPF1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm10553J3QPF1 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.68■□□□□ 0.74
Gm10553J3QPF1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm10553J3QPF1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm10553J3QPF1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm10553J3QPF1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm10553J3QPF1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm10553J3QPF1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.6■□□□□ 0.73
Gm10553J3QPF1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm10553J3QPF1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm10553J3QPF1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.59■□□□□ 0.73
Gm10553J3QPF1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Gm10553J3QPF1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm10553J3QPF1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm10553J3QPF1 Zfp131-205ENSMUST00000223812 663 ntBASIC19.57■□□□□ 0.72
Gm10553J3QPF1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm10553J3QPF1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gm10553J3QPF1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm10553J3QPF1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm10553J3QPF1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.53■□□□□ 0.72
Gm10553J3QPF1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Gm10553J3QPF1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm10553J3QPF1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Gm10553J3QPF1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Gm10553J3QPF1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm10553J3QPF1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.49■□□□□ 0.71
Gm10553J3QPF1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm10553J3QPF1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm10553J3QPF1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10553J3QPF1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10553J3QPF1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10553J3QPF1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10553J3QPF1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10553J3QPF1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.48■□□□□ 0.71
Gm10553J3QPF1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10553J3QPF1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.48■□□□□ 0.71
Gm10553J3QPF1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10553J3QPF1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm10553J3QPF1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm10553J3QPF1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Gm10553J3QPF1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm10553J3QPF1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Gm10553J3QPF1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm10553J3QPF1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.45■□□□□ 0.7
Gm10553J3QPF1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm10553J3QPF1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm10553J3QPF1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm10553J3QPF1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms