Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Gm24804-201ENSMUST00000174982 85 ntBASIC24.69■■□□□ 1.54
9930021J03RikH3BKP8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
9930021J03RikH3BKP8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
9930021J03RikH3BKP8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
9930021J03RikH3BKP8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
9930021J03RikH3BKP8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
9930021J03RikH3BKP8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
9930021J03RikH3BKP8 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.6■■□□□ 1.53
9930021J03RikH3BKP8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
9930021J03RikH3BKP8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.58■■□□□ 1.53
9930021J03RikH3BKP8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
9930021J03RikH3BKP8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
9930021J03RikH3BKP8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
9930021J03RikH3BKP8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
9930021J03RikH3BKP8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
9930021J03RikH3BKP8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
9930021J03RikH3BKP8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.54■■□□□ 1.52
9930021J03RikH3BKP8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
9930021J03RikH3BKP8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
9930021J03RikH3BKP8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
9930021J03RikH3BKP8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
9930021J03RikH3BKP8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
9930021J03RikH3BKP8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
9930021J03RikH3BKP8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
9930021J03RikH3BKP8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.47■■□□□ 1.51
9930021J03RikH3BKP8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
9930021J03RikH3BKP8 Peli2-204ENSMUST00000226513 1320 ntBASIC24.45■■□□□ 1.51
9930021J03RikH3BKP8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.45■■□□□ 1.5
9930021J03RikH3BKP8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
9930021J03RikH3BKP8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
9930021J03RikH3BKP8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
9930021J03RikH3BKP8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
9930021J03RikH3BKP8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
9930021J03RikH3BKP8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
9930021J03RikH3BKP8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
9930021J03RikH3BKP8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
9930021J03RikH3BKP8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.38■■□□□ 1.49
9930021J03RikH3BKP8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
9930021J03RikH3BKP8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
9930021J03RikH3BKP8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.37■■□□□ 1.49
9930021J03RikH3BKP8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
9930021J03RikH3BKP8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
9930021J03RikH3BKP8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
9930021J03RikH3BKP8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
9930021J03RikH3BKP8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
9930021J03RikH3BKP8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
9930021J03RikH3BKP8 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.27■■□□□ 1.48
9930021J03RikH3BKP8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
9930021J03RikH3BKP8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
9930021J03RikH3BKP8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
9930021J03RikH3BKP8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.25■■□□□ 1.47
9930021J03RikH3BKP8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
9930021J03RikH3BKP8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
9930021J03RikH3BKP8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.22■■□□□ 1.47
9930021J03RikH3BKP8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
9930021J03RikH3BKP8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
9930021J03RikH3BKP8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
9930021J03RikH3BKP8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
9930021J03RikH3BKP8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
9930021J03RikH3BKP8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
9930021J03RikH3BKP8 Gm16148-201ENSMUST00000119653 893 ntBASIC24.18■■□□□ 1.46
9930021J03RikH3BKP8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
9930021J03RikH3BKP8 Zfp131-205ENSMUST00000223812 663 ntBASIC24.18■■□□□ 1.46
9930021J03RikH3BKP8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
9930021J03RikH3BKP8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
9930021J03RikH3BKP8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
9930021J03RikH3BKP8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
9930021J03RikH3BKP8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
9930021J03RikH3BKP8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
9930021J03RikH3BKP8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
9930021J03RikH3BKP8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
9930021J03RikH3BKP8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
9930021J03RikH3BKP8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
9930021J03RikH3BKP8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
9930021J03RikH3BKP8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
9930021J03RikH3BKP8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
9930021J03RikH3BKP8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
9930021J03RikH3BKP8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
9930021J03RikH3BKP8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
9930021J03RikH3BKP8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
9930021J03RikH3BKP8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
9930021J03RikH3BKP8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
9930021J03RikH3BKP8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
9930021J03RikH3BKP8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
9930021J03RikH3BKP8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24■■□□□ 1.43
9930021J03RikH3BKP8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
9930021J03RikH3BKP8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
9930021J03RikH3BKP8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
9930021J03RikH3BKP8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
9930021J03RikH3BKP8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
9930021J03RikH3BKP8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.94■■□□□ 1.42
9930021J03RikH3BKP8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
9930021J03RikH3BKP8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.93■■□□□ 1.42
9930021J03RikH3BKP8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
9930021J03RikH3BKP8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
9930021J03RikH3BKP8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
9930021J03RikH3BKP8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
9930021J03RikH3BKP8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
9930021J03RikH3BKP8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
9930021J03RikH3BKP8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms