Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.09■□□□□ 0.65
Gm28305F6U473 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.09■□□□□ 0.65
Gm28305F6U473 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Gm28305F6U473 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
Gm28305F6U473 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28305F6U473 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28305F6U473 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.07■□□□□ 0.64
Gm28305F6U473 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28305F6U473 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28305F6U473 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28305F6U473 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28305F6U473 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28305F6U473 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28305F6U473 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28305F6U473 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28305F6U473 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gm28305F6U473 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Gm28305F6U473 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28305F6U473 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28305F6U473 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm28305F6U473 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm28305F6U473 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm28305F6U473 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Gm28305F6U473 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Gm28305F6U473 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28305F6U473 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28305F6U473 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28305F6U473 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Gm28305F6U473 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28305F6U473 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28305F6U473 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Gm28305F6U473 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.94■□□□□ 0.62
Gm28305F6U473 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Gm28305F6U473 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28305F6U473 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gm28305F6U473 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28305F6U473 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Gm28305F6U473 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28305F6U473 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28305F6U473 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.92■□□□□ 0.62
Gm28305F6U473 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28305F6U473 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gm28305F6U473 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28305F6U473 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28305F6U473 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28305F6U473 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28305F6U473 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28305F6U473 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm28305F6U473 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28305F6U473 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28305F6U473 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28305F6U473 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28305F6U473 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28305F6U473 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Gm28305F6U473 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.84■□□□□ 0.61
Gm28305F6U473 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28305F6U473 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28305F6U473 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28305F6U473 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28305F6U473 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28305F6U473 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28305F6U473 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Gm28305F6U473 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28305F6U473 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28305F6U473 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm28305F6U473 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28305F6U473 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28305F6U473 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28305F6U473 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.77■□□□□ 0.6
Gm28305F6U473 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gm28305F6U473 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28305F6U473 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28305F6U473 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28305F6U473 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28305F6U473 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28305F6U473 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28305F6U473 Amer2-203ENSMUST00000225247 2662 ntBASIC18.72■□□□□ 0.59
Gm28305F6U473 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gm28305F6U473 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28305F6U473 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gm28305F6U473 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Gm28305F6U473 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28305F6U473 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28305F6U473 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28305F6U473 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Gm28305F6U473 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28305F6U473 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28305F6U473 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28305F6U473 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28305F6U473 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28305F6U473 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gm28305F6U473 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28305F6U473 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm28305F6U473 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm28305F6U473 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28305F6U473 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28305F6U473 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28305F6U473 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28305F6U473 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28305F6U473 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms