Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pcdhb9E9Q5G2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pcdhb9E9Q5G2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Pcdhb9E9Q5G2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Pcdhb9E9Q5G2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pcdhb9E9Q5G2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pcdhb9E9Q5G2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.39■■■□□ 2.61
Pcdhb9E9Q5G2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pcdhb9E9Q5G2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.32■■■□□ 2.6
Pcdhb9E9Q5G2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.31■■■□□ 2.6
Pcdhb9E9Q5G2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Pcdhb9E9Q5G2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.3■■■□□ 2.6
Pcdhb9E9Q5G2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Pcdhb9E9Q5G2 Peli2-204ENSMUST00000226513 1320 ntBASIC31.29■■■□□ 2.6
Pcdhb9E9Q5G2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Pcdhb9E9Q5G2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Pcdhb9E9Q5G2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Pcdhb9E9Q5G2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pcdhb9E9Q5G2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Pcdhb9E9Q5G2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcdhb9E9Q5G2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pcdhb9E9Q5G2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pcdhb9E9Q5G2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pcdhb9E9Q5G2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Pcdhb9E9Q5G2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Pcdhb9E9Q5G2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Pcdhb9E9Q5G2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Pcdhb9E9Q5G2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pcdhb9E9Q5G2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pcdhb9E9Q5G2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.11■■■□□ 2.57
Pcdhb9E9Q5G2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Pcdhb9E9Q5G2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
Pcdhb9E9Q5G2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pcdhb9E9Q5G2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Pcdhb9E9Q5G2 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.08■■■□□ 2.57
Pcdhb9E9Q5G2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Pcdhb9E9Q5G2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Pcdhb9E9Q5G2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Pcdhb9E9Q5G2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Pcdhb9E9Q5G2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Pcdhb9E9Q5G2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
Pcdhb9E9Q5G2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pcdhb9E9Q5G2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Pcdhb9E9Q5G2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Pcdhb9E9Q5G2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Pcdhb9E9Q5G2 Gm16148-201ENSMUST00000119653 893 ntBASIC30.96■■■□□ 2.55
Pcdhb9E9Q5G2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Pcdhb9E9Q5G2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pcdhb9E9Q5G2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.91■■■□□ 2.54
Pcdhb9E9Q5G2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pcdhb9E9Q5G2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Pcdhb9E9Q5G2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Pcdhb9E9Q5G2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Pcdhb9E9Q5G2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Pcdhb9E9Q5G2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Pcdhb9E9Q5G2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Pcdhb9E9Q5G2 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.81■■■□□ 2.52
Pcdhb9E9Q5G2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Pcdhb9E9Q5G2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.79■■■□□ 2.52
Pcdhb9E9Q5G2 Zfp131-205ENSMUST00000223812 663 ntBASIC30.78■■■□□ 2.52
Pcdhb9E9Q5G2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Pcdhb9E9Q5G2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pcdhb9E9Q5G2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Pcdhb9E9Q5G2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
Pcdhb9E9Q5G2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.71■■■□□ 2.51
Pcdhb9E9Q5G2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Pcdhb9E9Q5G2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pcdhb9E9Q5G2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Pcdhb9E9Q5G2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pcdhb9E9Q5G2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.68■■■□□ 2.5
Pcdhb9E9Q5G2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.68■■■□□ 2.5
Pcdhb9E9Q5G2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
Pcdhb9E9Q5G2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pcdhb9E9Q5G2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Pcdhb9E9Q5G2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.49
Pcdhb9E9Q5G2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.63■■■□□ 2.49
Pcdhb9E9Q5G2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.61■■■□□ 2.49
Pcdhb9E9Q5G2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pcdhb9E9Q5G2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pcdhb9E9Q5G2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pcdhb9E9Q5G2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Pcdhb9E9Q5G2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Pcdhb9E9Q5G2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
Pcdhb9E9Q5G2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
Pcdhb9E9Q5G2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Pcdhb9E9Q5G2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.56■■■□□ 2.48
Pcdhb9E9Q5G2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Pcdhb9E9Q5G2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
Pcdhb9E9Q5G2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Pcdhb9E9Q5G2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Pcdhb9E9Q5G2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Pcdhb9E9Q5G2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.54■■■□□ 2.48
Pcdhb9E9Q5G2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.54■■■□□ 2.48
Pcdhb9E9Q5G2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pcdhb9E9Q5G2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.53■■■□□ 2.48
Pcdhb9E9Q5G2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Pcdhb9E9Q5G2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Pcdhb9E9Q5G2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Pcdhb9E9Q5G2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
Pcdhb9E9Q5G2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.49■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms