Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Frmpd3A0A140LIW3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Frmpd3A0A140LIW3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Frmpd3A0A140LIW3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Frmpd3A0A140LIW3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Frmpd3A0A140LIW3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Frmpd3A0A140LIW3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Frmpd3A0A140LIW3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Frmpd3A0A140LIW3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Frmpd3A0A140LIW3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Frmpd3A0A140LIW3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Frmpd3A0A140LIW3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
Frmpd3A0A140LIW3 Gm9397-201ENSMUST00000200125 605 ntBASIC33.06■■■□□ 2.88
Frmpd3A0A140LIW3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Frmpd3A0A140LIW3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Frmpd3A0A140LIW3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Frmpd3A0A140LIW3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.94■■■□□ 2.86
Frmpd3A0A140LIW3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Frmpd3A0A140LIW3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Frmpd3A0A140LIW3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.91■■■□□ 2.86
Frmpd3A0A140LIW3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.91■■■□□ 2.86
Frmpd3A0A140LIW3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Frmpd3A0A140LIW3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32.88■■■□□ 2.85
Frmpd3A0A140LIW3 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.88■■■□□ 2.85
Frmpd3A0A140LIW3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Frmpd3A0A140LIW3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
Frmpd3A0A140LIW3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Frmpd3A0A140LIW3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Frmpd3A0A140LIW3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.85■■■□□ 2.85
Frmpd3A0A140LIW3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Frmpd3A0A140LIW3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Frmpd3A0A140LIW3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
Frmpd3A0A140LIW3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Frmpd3A0A140LIW3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC32.81■■■□□ 2.84
Frmpd3A0A140LIW3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
Frmpd3A0A140LIW3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Frmpd3A0A140LIW3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Frmpd3A0A140LIW3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.78■■■□□ 2.84
Frmpd3A0A140LIW3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Frmpd3A0A140LIW3 Mipep-204ENSMUST00000225043 1548 ntBASIC32.77■■■□□ 2.84
Frmpd3A0A140LIW3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Frmpd3A0A140LIW3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.74■■■□□ 2.83
Frmpd3A0A140LIW3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Frmpd3A0A140LIW3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC32.71■■■□□ 2.83
Frmpd3A0A140LIW3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Frmpd3A0A140LIW3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32.7■■■□□ 2.83
Frmpd3A0A140LIW3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
Frmpd3A0A140LIW3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Frmpd3A0A140LIW3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.69■■■□□ 2.82
Frmpd3A0A140LIW3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Frmpd3A0A140LIW3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Frmpd3A0A140LIW3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Frmpd3A0A140LIW3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.63■■■□□ 2.81
Frmpd3A0A140LIW3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Frmpd3A0A140LIW3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Frmpd3A0A140LIW3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
Frmpd3A0A140LIW3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Frmpd3A0A140LIW3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.58■■■□□ 2.81
Frmpd3A0A140LIW3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32.55■■■□□ 2.8
Frmpd3A0A140LIW3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.49■■■□□ 2.79
Frmpd3A0A140LIW3 Gm24970-201ENSMUST00000175582 82 ntBASIC32.49■■■□□ 2.79
Frmpd3A0A140LIW3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32.47■■■□□ 2.79
Frmpd3A0A140LIW3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Frmpd3A0A140LIW3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Frmpd3A0A140LIW3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Frmpd3A0A140LIW3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Frmpd3A0A140LIW3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.38■■■□□ 2.77
Frmpd3A0A140LIW3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32.38■■■□□ 2.77
Frmpd3A0A140LIW3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC32.37■■■□□ 2.77
Frmpd3A0A140LIW3 Gm8503-201ENSMUST00000118131 455 ntBASIC32.36■■■□□ 2.77
Frmpd3A0A140LIW3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Frmpd3A0A140LIW3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.34■■■□□ 2.77
Frmpd3A0A140LIW3 Gm9939-201ENSMUST00000067161 1154 ntBASIC32.34■■■□□ 2.77
Frmpd3A0A140LIW3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Frmpd3A0A140LIW3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Frmpd3A0A140LIW3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Frmpd3A0A140LIW3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Frmpd3A0A140LIW3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Frmpd3A0A140LIW3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Frmpd3A0A140LIW3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Frmpd3A0A140LIW3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
Frmpd3A0A140LIW3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Frmpd3A0A140LIW3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
Frmpd3A0A140LIW3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Frmpd3A0A140LIW3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Frmpd3A0A140LIW3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Frmpd3A0A140LIW3 Gm6821-201ENSMUST00000107540 542 ntBASIC32.04■■■□□ 2.72
Frmpd3A0A140LIW3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.04■■■□□ 2.72
Frmpd3A0A140LIW3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
Frmpd3A0A140LIW3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.03■■■□□ 2.72
Frmpd3A0A140LIW3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
Frmpd3A0A140LIW3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32■■■□□ 2.71
Frmpd3A0A140LIW3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32■■■□□ 2.71
Frmpd3A0A140LIW3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Frmpd3A0A140LIW3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Frmpd3A0A140LIW3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
Frmpd3A0A140LIW3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Frmpd3A0A140LIW3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Frmpd3A0A140LIW3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.94■■■□□ 2.7
Frmpd3A0A140LIW3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms