Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ighv9-3A0A0B4J1J5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.82■■□□□ 1.08
Ighv9-3A0A0B4J1J5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ighv9-3A0A0B4J1J5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv9-3A0A0B4J1J5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ighv9-3A0A0B4J1J5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv9-3A0A0B4J1J5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.74■■□□□ 1.07
Ighv9-3A0A0B4J1J5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ighv9-3A0A0B4J1J5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ighv9-3A0A0B4J1J5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv9-3A0A0B4J1J5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ighv9-3A0A0B4J1J5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ighv9-3A0A0B4J1J5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv9-3A0A0B4J1J5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv9-3A0A0B4J1J5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv9-3A0A0B4J1J5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ighv9-3A0A0B4J1J5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.65■■□□□ 1.06
Ighv9-3A0A0B4J1J5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ighv9-3A0A0B4J1J5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv9-3A0A0B4J1J5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Peli2-204ENSMUST00000226513 1320 ntBASIC21.63■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.62■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.59■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ighv9-3A0A0B4J1J5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ighv9-3A0A0B4J1J5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ighv9-3A0A0B4J1J5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ighv9-3A0A0B4J1J5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv9-3A0A0B4J1J5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ighv9-3A0A0B4J1J5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ighv9-3A0A0B4J1J5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ighv9-3A0A0B4J1J5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.51■■□□□ 1.03
Ighv9-3A0A0B4J1J5 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.5■■□□□ 1.03
Ighv9-3A0A0B4J1J5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ighv9-3A0A0B4J1J5 Gm16148-201ENSMUST00000119653 893 ntBASIC21.5■■□□□ 1.03
Ighv9-3A0A0B4J1J5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv9-3A0A0B4J1J5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv9-3A0A0B4J1J5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv9-3A0A0B4J1J5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv9-3A0A0B4J1J5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Ighv9-3A0A0B4J1J5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv9-3A0A0B4J1J5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv9-3A0A0B4J1J5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv9-3A0A0B4J1J5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv9-3A0A0B4J1J5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv9-3A0A0B4J1J5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv9-3A0A0B4J1J5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ighv9-3A0A0B4J1J5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv9-3A0A0B4J1J5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv9-3A0A0B4J1J5 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.35■■□□□ 1.01
Ighv9-3A0A0B4J1J5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.34■■□□□ 1.01
Ighv9-3A0A0B4J1J5 Zfp131-205ENSMUST00000223812 663 ntBASIC21.33■■□□□ 1.01
Ighv9-3A0A0B4J1J5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ighv9-3A0A0B4J1J5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ighv9-3A0A0B4J1J5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ighv9-3A0A0B4J1J5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ighv9-3A0A0B4J1J5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ighv9-3A0A0B4J1J5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ighv9-3A0A0B4J1J5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ighv9-3A0A0B4J1J5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ighv9-3A0A0B4J1J5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Ighv9-3A0A0B4J1J5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ighv9-3A0A0B4J1J5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.24■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.22■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.21■□□□□ 0.99
Ighv9-3A0A0B4J1J5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv9-3A0A0B4J1J5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv9-3A0A0B4J1J5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.2■□□□□ 0.98
Ighv9-3A0A0B4J1J5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv9-3A0A0B4J1J5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Ighv9-3A0A0B4J1J5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.19■□□□□ 0.98
Ighv9-3A0A0B4J1J5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.18■□□□□ 0.98
Ighv9-3A0A0B4J1J5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.18■□□□□ 0.98
Ighv9-3A0A0B4J1J5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv9-3A0A0B4J1J5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv9-3A0A0B4J1J5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ighv9-3A0A0B4J1J5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ighv9-3A0A0B4J1J5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ighv9-3A0A0B4J1J5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ighv9-3A0A0B4J1J5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv9-3A0A0B4J1J5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.13■□□□□ 0.97
Ighv9-3A0A0B4J1J5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Ighv9-3A0A0B4J1J5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms