Protein–RNA interactions for Protein: A0A087WPJ1

1700017N19Rik, RIKEN cDNA 1700017N19 gene, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700017N19RikA0A087WPJ1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
1700017N19RikA0A087WPJ1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
1700017N19RikA0A087WPJ1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
1700017N19RikA0A087WPJ1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
1700017N19RikA0A087WPJ1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
1700017N19RikA0A087WPJ1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
1700017N19RikA0A087WPJ1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
1700017N19RikA0A087WPJ1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.75■■■□□ 2.19
1700017N19RikA0A087WPJ1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
1700017N19RikA0A087WPJ1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.75■■■□□ 2.19
1700017N19RikA0A087WPJ1 Mipep-204ENSMUST00000225043 1548 ntBASIC28.73■■■□□ 2.19
1700017N19RikA0A087WPJ1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
1700017N19RikA0A087WPJ1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
1700017N19RikA0A087WPJ1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
1700017N19RikA0A087WPJ1 Zfp131-205ENSMUST00000223812 663 ntBASIC28.68■■■□□ 2.18
1700017N19RikA0A087WPJ1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
1700017N19RikA0A087WPJ1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
1700017N19RikA0A087WPJ1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
1700017N19RikA0A087WPJ1 Zxda-201ENSMUST00000117281 2621 ntBASIC28.64■■■□□ 2.18
1700017N19RikA0A087WPJ1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.63■■■□□ 2.17
1700017N19RikA0A087WPJ1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
1700017N19RikA0A087WPJ1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
1700017N19RikA0A087WPJ1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
1700017N19RikA0A087WPJ1 Peli2-204ENSMUST00000226513 1320 ntBASIC28.61■■■□□ 2.17
1700017N19RikA0A087WPJ1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
1700017N19RikA0A087WPJ1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
1700017N19RikA0A087WPJ1 Gm16148-201ENSMUST00000119653 893 ntBASIC28.58■■■□□ 2.17
1700017N19RikA0A087WPJ1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
1700017N19RikA0A087WPJ1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
1700017N19RikA0A087WPJ1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
1700017N19RikA0A087WPJ1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
1700017N19RikA0A087WPJ1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
1700017N19RikA0A087WPJ1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
1700017N19RikA0A087WPJ1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
1700017N19RikA0A087WPJ1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
1700017N19RikA0A087WPJ1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.52■■■□□ 2.16
1700017N19RikA0A087WPJ1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
1700017N19RikA0A087WPJ1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
1700017N19RikA0A087WPJ1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
1700017N19RikA0A087WPJ1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
1700017N19RikA0A087WPJ1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
1700017N19RikA0A087WPJ1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
1700017N19RikA0A087WPJ1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
1700017N19RikA0A087WPJ1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
1700017N19RikA0A087WPJ1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
1700017N19RikA0A087WPJ1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
1700017N19RikA0A087WPJ1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.39■■■□□ 2.14
1700017N19RikA0A087WPJ1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
1700017N19RikA0A087WPJ1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.38■■■□□ 2.13
1700017N19RikA0A087WPJ1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.38■■■□□ 2.13
1700017N19RikA0A087WPJ1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
1700017N19RikA0A087WPJ1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.36■■■□□ 2.13
1700017N19RikA0A087WPJ1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
1700017N19RikA0A087WPJ1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
1700017N19RikA0A087WPJ1 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.34■■■□□ 2.13
1700017N19RikA0A087WPJ1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.32■■■□□ 2.12
1700017N19RikA0A087WPJ1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
1700017N19RikA0A087WPJ1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
1700017N19RikA0A087WPJ1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
1700017N19RikA0A087WPJ1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
1700017N19RikA0A087WPJ1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
1700017N19RikA0A087WPJ1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
1700017N19RikA0A087WPJ1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
1700017N19RikA0A087WPJ1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
1700017N19RikA0A087WPJ1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
1700017N19RikA0A087WPJ1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
1700017N19RikA0A087WPJ1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
1700017N19RikA0A087WPJ1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
1700017N19RikA0A087WPJ1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
1700017N19RikA0A087WPJ1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.2■■■□□ 2.1
1700017N19RikA0A087WPJ1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
1700017N19RikA0A087WPJ1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.18■■■□□ 2.1
1700017N19RikA0A087WPJ1 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.18■■■□□ 2.1
1700017N19RikA0A087WPJ1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.15■■■□□ 2.1
1700017N19RikA0A087WPJ1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
1700017N19RikA0A087WPJ1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
1700017N19RikA0A087WPJ1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
1700017N19RikA0A087WPJ1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
1700017N19RikA0A087WPJ1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
1700017N19RikA0A087WPJ1 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.1■■■□□ 2.09
1700017N19RikA0A087WPJ1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.09■■■□□ 2.09
1700017N19RikA0A087WPJ1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
1700017N19RikA0A087WPJ1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.07■■■□□ 2.08
1700017N19RikA0A087WPJ1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
1700017N19RikA0A087WPJ1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
1700017N19RikA0A087WPJ1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
1700017N19RikA0A087WPJ1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
1700017N19RikA0A087WPJ1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
1700017N19RikA0A087WPJ1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
1700017N19RikA0A087WPJ1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.97■■■□□ 2.07
1700017N19RikA0A087WPJ1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
1700017N19RikA0A087WPJ1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
1700017N19RikA0A087WPJ1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
1700017N19RikA0A087WPJ1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.93■■■□□ 2.06
1700017N19RikA0A087WPJ1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
1700017N19RikA0A087WPJ1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
1700017N19RikA0A087WPJ1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
1700017N19RikA0A087WPJ1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
1700017N19RikA0A087WPJ1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.89■■■□□ 2.06
1700017N19RikA0A087WPJ1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms