Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav14d-1A0A075B6B1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.32■□□□□ 0.68
Trav14d-1A0A075B6B1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav14d-1A0A075B6B1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav14d-1A0A075B6B1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav14d-1A0A075B6B1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
Trav14d-1A0A075B6B1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav14d-1A0A075B6B1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav14d-1A0A075B6B1 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.28■□□□□ 0.68
Trav14d-1A0A075B6B1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav14d-1A0A075B6B1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav14d-1A0A075B6B1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav14d-1A0A075B6B1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trav14d-1A0A075B6B1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav14d-1A0A075B6B1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav14d-1A0A075B6B1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Trav14d-1A0A075B6B1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav14d-1A0A075B6B1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav14d-1A0A075B6B1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav14d-1A0A075B6B1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav14d-1A0A075B6B1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav14d-1A0A075B6B1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav14d-1A0A075B6B1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav14d-1A0A075B6B1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav14d-1A0A075B6B1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav14d-1A0A075B6B1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav14d-1A0A075B6B1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav14d-1A0A075B6B1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.19■□□□□ 0.66
Trav14d-1A0A075B6B1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav14d-1A0A075B6B1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav14d-1A0A075B6B1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav14d-1A0A075B6B1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav14d-1A0A075B6B1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav14d-1A0A075B6B1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav14d-1A0A075B6B1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trav14d-1A0A075B6B1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.13■□□□□ 0.65
Trav14d-1A0A075B6B1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav14d-1A0A075B6B1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav14d-1A0A075B6B1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trav14d-1A0A075B6B1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav14d-1A0A075B6B1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav14d-1A0A075B6B1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav14d-1A0A075B6B1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trav14d-1A0A075B6B1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav14d-1A0A075B6B1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trav14d-1A0A075B6B1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trav14d-1A0A075B6B1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav14d-1A0A075B6B1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav14d-1A0A075B6B1 Amer2-203ENSMUST00000225247 2662 ntBASIC19.07■□□□□ 0.64
Trav14d-1A0A075B6B1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav14d-1A0A075B6B1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Trav14d-1A0A075B6B1 Gm25238-201ENSMUST00000174914 89 ntBASIC19.01■□□□□ 0.63
Trav14d-1A0A075B6B1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trav14d-1A0A075B6B1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav14d-1A0A075B6B1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav14d-1A0A075B6B1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav14d-1A0A075B6B1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav14d-1A0A075B6B1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav14d-1A0A075B6B1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav14d-1A0A075B6B1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.98■□□□□ 0.63
Trav14d-1A0A075B6B1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav14d-1A0A075B6B1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav14d-1A0A075B6B1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav14d-1A0A075B6B1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav14d-1A0A075B6B1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav14d-1A0A075B6B1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav14d-1A0A075B6B1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav14d-1A0A075B6B1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav14d-1A0A075B6B1 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.93■□□□□ 0.62
Trav14d-1A0A075B6B1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav14d-1A0A075B6B1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav14d-1A0A075B6B1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav14d-1A0A075B6B1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.93■□□□□ 0.62
Trav14d-1A0A075B6B1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.9■□□□□ 0.62
Trav14d-1A0A075B6B1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav14d-1A0A075B6B1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.88■□□□□ 0.61
Trav14d-1A0A075B6B1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav14d-1A0A075B6B1 Mipep-204ENSMUST00000225043 1548 ntBASIC18.88■□□□□ 0.61
Trav14d-1A0A075B6B1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav14d-1A0A075B6B1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav14d-1A0A075B6B1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trav14d-1A0A075B6B1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav14d-1A0A075B6B1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav14d-1A0A075B6B1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav14d-1A0A075B6B1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav14d-1A0A075B6B1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav14d-1A0A075B6B1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav14d-1A0A075B6B1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav14d-1A0A075B6B1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav14d-1A0A075B6B1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.83■□□□□ 0.6
Trav14d-1A0A075B6B1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav14d-1A0A075B6B1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav14d-1A0A075B6B1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav14d-1A0A075B6B1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav14d-1A0A075B6B1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav14d-1A0A075B6B1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav14d-1A0A075B6B1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14d-1A0A075B6B1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14d-1A0A075B6B1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14d-1A0A075B6B1 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms