Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav13d-1A0A075B606 Zfp131-205ENSMUST00000223812 663 ntBASIC18.94■□□□□ 0.62
Trav13d-1A0A075B606 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13d-1A0A075B606 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13d-1A0A075B606 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13d-1A0A075B606 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trav13d-1A0A075B606 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav13d-1A0A075B606 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav13d-1A0A075B606 Gm16148-201ENSMUST00000119653 893 ntBASIC18.9■□□□□ 0.62
Trav13d-1A0A075B606 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav13d-1A0A075B606 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trav13d-1A0A075B606 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav13d-1A0A075B606 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav13d-1A0A075B606 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav13d-1A0A075B606 Peli2-204ENSMUST00000226513 1320 ntBASIC18.86■□□□□ 0.61
Trav13d-1A0A075B606 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trav13d-1A0A075B606 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav13d-1A0A075B606 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav13d-1A0A075B606 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trav13d-1A0A075B606 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav13d-1A0A075B606 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav13d-1A0A075B606 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav13d-1A0A075B606 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav13d-1A0A075B606 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav13d-1A0A075B606 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav13d-1A0A075B606 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav13d-1A0A075B606 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav13d-1A0A075B606 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav13d-1A0A075B606 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav13d-1A0A075B606 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav13d-1A0A075B606 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav13d-1A0A075B606 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav13d-1A0A075B606 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav13d-1A0A075B606 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav13d-1A0A075B606 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.77■□□□□ 0.6
Trav13d-1A0A075B606 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav13d-1A0A075B606 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav13d-1A0A075B606 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav13d-1A0A075B606 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav13d-1A0A075B606 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-1A0A075B606 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav13d-1A0A075B606 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.72■□□□□ 0.59
Trav13d-1A0A075B606 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13d-1A0A075B606 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13d-1A0A075B606 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.71■□□□□ 0.59
Trav13d-1A0A075B606 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Trav13d-1A0A075B606 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-1A0A075B606 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav13d-1A0A075B606 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav13d-1A0A075B606 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav13d-1A0A075B606 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav13d-1A0A075B606 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.63■□□□□ 0.57
Trav13d-1A0A075B606 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav13d-1A0A075B606 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trav13d-1A0A075B606 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.62■□□□□ 0.57
Trav13d-1A0A075B606 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13d-1A0A075B606 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav13d-1A0A075B606 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13d-1A0A075B606 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-1A0A075B606 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav13d-1A0A075B606 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trav13d-1A0A075B606 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.58■□□□□ 0.56
Trav13d-1A0A075B606 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trav13d-1A0A075B606 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav13d-1A0A075B606 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.56■□□□□ 0.56
Trav13d-1A0A075B606 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav13d-1A0A075B606 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav13d-1A0A075B606 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav13d-1A0A075B606 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trav13d-1A0A075B606 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav13d-1A0A075B606 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav13d-1A0A075B606 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav13d-1A0A075B606 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav13d-1A0A075B606 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav13d-1A0A075B606 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav13d-1A0A075B606 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav13d-1A0A075B606 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
Trav13d-1A0A075B606 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav13d-1A0A075B606 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-1A0A075B606 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.44■□□□□ 0.54
Trav13d-1A0A075B606 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-1A0A075B606 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.43■□□□□ 0.54
Trav13d-1A0A075B606 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13d-1A0A075B606 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13d-1A0A075B606 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13d-1A0A075B606 Gm45855-201ENSMUST00000212546 880 ntBASIC18.41■□□□□ 0.54
Trav13d-1A0A075B606 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.41■□□□□ 0.54
Trav13d-1A0A075B606 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13d-1A0A075B606 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13d-1A0A075B606 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav13d-1A0A075B606 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13d-1A0A075B606 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13d-1A0A075B606 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13d-1A0A075B606 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13d-1A0A075B606 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.35■□□□□ 0.53
Trav13d-1A0A075B606 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-1A0A075B606 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trav13d-1A0A075B606 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-1A0A075B606 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13d-1A0A075B606 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms