Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.78■■□□□ 1.24
Trav5-1A0A075B5Z7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.77■■□□□ 1.24
Trav5-1A0A075B5Z7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trav5-1A0A075B5Z7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trav5-1A0A075B5Z7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trav5-1A0A075B5Z7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Trav5-1A0A075B5Z7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Trav5-1A0A075B5Z7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.72■■□□□ 1.23
Trav5-1A0A075B5Z7 Peli2-204ENSMUST00000226513 1320 ntBASIC22.72■■□□□ 1.23
Trav5-1A0A075B5Z7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Trav5-1A0A075B5Z7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trav5-1A0A075B5Z7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Trav5-1A0A075B5Z7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Trav5-1A0A075B5Z7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trav5-1A0A075B5Z7 Gm16148-201ENSMUST00000119653 893 ntBASIC22.65■■□□□ 1.22
Trav5-1A0A075B5Z7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trav5-1A0A075B5Z7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trav5-1A0A075B5Z7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trav5-1A0A075B5Z7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trav5-1A0A075B5Z7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trav5-1A0A075B5Z7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Trav5-1A0A075B5Z7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trav5-1A0A075B5Z7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trav5-1A0A075B5Z7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trav5-1A0A075B5Z7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trav5-1A0A075B5Z7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.55■■□□□ 1.2
Trav5-1A0A075B5Z7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Trav5-1A0A075B5Z7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trav5-1A0A075B5Z7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trav5-1A0A075B5Z7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.54■■□□□ 1.2
Trav5-1A0A075B5Z7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trav5-1A0A075B5Z7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trav5-1A0A075B5Z7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trav5-1A0A075B5Z7 Zfp131-205ENSMUST00000223812 663 ntBASIC22.49■■□□□ 1.19
Trav5-1A0A075B5Z7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trav5-1A0A075B5Z7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
Trav5-1A0A075B5Z7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Trav5-1A0A075B5Z7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Trav5-1A0A075B5Z7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Trav5-1A0A075B5Z7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trav5-1A0A075B5Z7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trav5-1A0A075B5Z7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.42■■□□□ 1.18
Trav5-1A0A075B5Z7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trav5-1A0A075B5Z7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trav5-1A0A075B5Z7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trav5-1A0A075B5Z7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trav5-1A0A075B5Z7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trav5-1A0A075B5Z7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Trav5-1A0A075B5Z7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trav5-1A0A075B5Z7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trav5-1A0A075B5Z7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trav5-1A0A075B5Z7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Trav5-1A0A075B5Z7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trav5-1A0A075B5Z7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trav5-1A0A075B5Z7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trav5-1A0A075B5Z7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.33■■□□□ 1.17
Trav5-1A0A075B5Z7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trav5-1A0A075B5Z7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav5-1A0A075B5Z7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.3■■□□□ 1.16
Trav5-1A0A075B5Z7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav5-1A0A075B5Z7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trav5-1A0A075B5Z7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trav5-1A0A075B5Z7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.29■■□□□ 1.16
Trav5-1A0A075B5Z7 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.28■■□□□ 1.16
Trav5-1A0A075B5Z7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trav5-1A0A075B5Z7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trav5-1A0A075B5Z7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trav5-1A0A075B5Z7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.24■■□□□ 1.15
Trav5-1A0A075B5Z7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trav5-1A0A075B5Z7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trav5-1A0A075B5Z7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
Trav5-1A0A075B5Z7 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.22■■□□□ 1.15
Trav5-1A0A075B5Z7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.22■■□□□ 1.15
Trav5-1A0A075B5Z7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.21■■□□□ 1.15
Trav5-1A0A075B5Z7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trav5-1A0A075B5Z7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trav5-1A0A075B5Z7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trav5-1A0A075B5Z7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav5-1A0A075B5Z7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Trav5-1A0A075B5Z7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav5-1A0A075B5Z7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.17■■□□□ 1.14
Trav5-1A0A075B5Z7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
Trav5-1A0A075B5Z7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trav5-1A0A075B5Z7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav5-1A0A075B5Z7 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.15■■□□□ 1.14
Trav5-1A0A075B5Z7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trav5-1A0A075B5Z7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trav5-1A0A075B5Z7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trav5-1A0A075B5Z7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.13■■□□□ 1.13
Trav5-1A0A075B5Z7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav5-1A0A075B5Z7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.12■■□□□ 1.13
Trav5-1A0A075B5Z7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav5-1A0A075B5Z7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Trav5-1A0A075B5Z7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trav5-1A0A075B5Z7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Trav5-1A0A075B5Z7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.09■■□□□ 1.13
Trav5-1A0A075B5Z7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trav5-1A0A075B5Z7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav5-1A0A075B5Z7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav5-1A0A075B5Z7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms