Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.73■□□□□ 0.59
Lhx6Q9R1R0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Gm43371-201ENSMUST00000202838 1031 ntBASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx6Q9R1R0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 Gm40848-201ENSMUST00000221998 324 ntBASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx6Q9R1R0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Lhx6Q9R1R0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Gm42778-201ENSMUST00000199644 553 ntBASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Gm45691-201ENSMUST00000206905 1120 ntBASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Gm25007-201ENSMUST00000083808 133 ntBASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx6Q9R1R0 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.69■□□□□ 0.58
Lhx6Q9R1R0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx6Q9R1R0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.69■□□□□ 0.58
Lhx6Q9R1R0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.69■□□□□ 0.58
Lhx6Q9R1R0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.69■□□□□ 0.58
Lhx6Q9R1R0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx6Q9R1R0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx6Q9R1R0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx6Q9R1R0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx6Q9R1R0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx6Q9R1R0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx6Q9R1R0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx6Q9R1R0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lhx6Q9R1R0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx6Q9R1R0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx6Q9R1R0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.68■□□□□ 0.58
Lhx6Q9R1R0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx6Q9R1R0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lhx6Q9R1R0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lhx6Q9R1R0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx6Q9R1R0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx6Q9R1R0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.65■□□□□ 0.58
Lhx6Q9R1R0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.65■□□□□ 0.58
Lhx6Q9R1R0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.65■□□□□ 0.58
Lhx6Q9R1R0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx6Q9R1R0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.65■□□□□ 0.58
Lhx6Q9R1R0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx6Q9R1R0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx6Q9R1R0 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms