Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.69■□□□□ 0.26
Herpud1Q9JJK5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Herpud1Q9JJK5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.67■□□□□ 0.26
Herpud1Q9JJK5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Herpud1Q9JJK5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.65■□□□□ 0.26
Herpud1Q9JJK5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Herpud1Q9JJK5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Herpud1Q9JJK5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.62■□□□□ 0.25
Herpud1Q9JJK5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Herpud1Q9JJK5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Herpud1Q9JJK5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Herpud1Q9JJK5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Herpud1Q9JJK5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Herpud1Q9JJK5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Herpud1Q9JJK5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms