Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mbd3l1Q9D9H3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mbd3l1Q9D9H3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mbd3l1Q9D9H3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.43■□□□□ 0.38
Mbd3l1Q9D9H3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mbd3l1Q9D9H3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Mbd3l1Q9D9H3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mbd3l1Q9D9H3 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.39■□□□□ 0.38
Mbd3l1Q9D9H3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mbd3l1Q9D9H3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Mbd3l1Q9D9H3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mbd3l1Q9D9H3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mbd3l1Q9D9H3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mbd3l1Q9D9H3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mbd3l1Q9D9H3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mbd3l1Q9D9H3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Mbd3l1Q9D9H3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Mbd3l1Q9D9H3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mbd3l1Q9D9H3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mbd3l1Q9D9H3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mbd3l1Q9D9H3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mbd3l1Q9D9H3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.35■□□□□ 0.37
Mbd3l1Q9D9H3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms