Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Lysmd3Q99LE3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lysmd3Q99LE3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lysmd3Q99LE3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lysmd3Q99LE3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lysmd3Q99LE3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd3Q99LE3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd3Q99LE3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd3Q99LE3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Lysmd3Q99LE3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd3Q99LE3 Gm12251-201ENSMUST00000117893 792 ntBASIC20.86■□□□□ 0.93
Lysmd3Q99LE3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd3Q99LE3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Lysmd3Q99LE3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd3Q99LE3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd3Q99LE3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lysmd3Q99LE3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lysmd3Q99LE3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lysmd3Q99LE3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lysmd3Q99LE3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lysmd3Q99LE3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.85■□□□□ 0.93
Lysmd3Q99LE3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lysmd3Q99LE3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lysmd3Q99LE3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.84■□□□□ 0.93
Lysmd3Q99LE3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.84■□□□□ 0.93
Lysmd3Q99LE3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lysmd3Q99LE3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lysmd3Q99LE3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lysmd3Q99LE3 Gm8493-201ENSMUST00000196881 489 ntBASIC20.84■□□□□ 0.93
Lysmd3Q99LE3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Lysmd3Q99LE3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.84■□□□□ 0.93
Lysmd3Q99LE3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lysmd3Q99LE3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lysmd3Q99LE3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lysmd3Q99LE3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.82■□□□□ 0.92
Lysmd3Q99LE3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Gm43017-201ENSMUST00000198296 752 ntBASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd3Q99LE3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Spcs1-204ENSMUST00000226782 949 ntBASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Lysmd3Q99LE3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms