Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Pcdhgb1Q91XX8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhgb1Q91XX8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb1Q91XX8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb1Q91XX8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb1Q91XX8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.89■□□□□ 0.93
Pcdhgb1Q91XX8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb1Q91XX8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb1Q91XX8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhgb1Q91XX8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb1Q91XX8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb1Q91XX8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb1Q91XX8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb1Q91XX8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhgb1Q91XX8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.88■□□□□ 0.93
Pcdhgb1Q91XX8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb1Q91XX8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhgb1Q91XX8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb1Q91XX8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb1Q91XX8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Pcdhgb1Q91XX8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb1Q91XX8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Pcdhgb1Q91XX8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdhgb1Q91XX8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgb1Q91XX8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb1Q91XX8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb1Q91XX8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Pcdhgb1Q91XX8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb1Q91XX8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb1Q91XX8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb1Q91XX8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb1Q91XX8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb1Q91XX8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb1Q91XX8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb1Q91XX8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb1Q91XX8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb1Q91XX8 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb1Q91XX8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgb1Q91XX8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgb1Q91XX8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Pcdhgb1Q91XX8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcdhgb1Q91XX8 Gm43173-201ENSMUST00000202246 593 ntBASIC20.83■□□□□ 0.93
Pcdhgb1Q91XX8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcdhgb1Q91XX8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhgb1Q91XX8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhgb1Q91XX8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb1Q91XX8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb1Q91XX8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms