Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgc3Q91XX1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdhgc3Q91XX1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Gm7332-201ENSMUST00000118351 454 ntBASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Gm27502-201ENSMUST00000183495 199 ntBASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhgc3Q91XX1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Gm12366-201ENSMUST00000121722 873 ntBASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Gm5786-201ENSMUST00000085368 882 ntBASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc3Q91XX1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhgc3Q91XX1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhgc3Q91XX1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhgc3Q91XX1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc3Q91XX1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc3Q91XX1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc3Q91XX1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc3Q91XX1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhgc3Q91XX1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc3Q91XX1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Pcdhgc3Q91XX1 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.87■□□□□ 0.61
Pcdhgc3Q91XX1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhgc3Q91XX1 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.87■□□□□ 0.61
Pcdhgc3Q91XX1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc3Q91XX1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgc3Q91XX1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 175.3 ms