Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc65Q8VHI7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc65Q8VHI7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc65Q8VHI7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc65Q8VHI7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc65Q8VHI7 Gm22238-201ENSMUST00000175222 88 ntBASIC21.17■□□□□ 0.98
Ccdc65Q8VHI7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.17■□□□□ 0.98
Ccdc65Q8VHI7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc65Q8VHI7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc65Q8VHI7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc65Q8VHI7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
Ccdc65Q8VHI7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc65Q8VHI7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc65Q8VHI7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc65Q8VHI7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc65Q8VHI7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc65Q8VHI7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc65Q8VHI7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc65Q8VHI7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Ccdc65Q8VHI7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc65Q8VHI7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Gm9870-201ENSMUST00000063874 645 ntBASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc65Q8VHI7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc65Q8VHI7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc65Q8VHI7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc65Q8VHI7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc65Q8VHI7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ccdc65Q8VHI7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc65Q8VHI7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc65Q8VHI7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc65Q8VHI7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
Ccdc65Q8VHI7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc65Q8VHI7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc65Q8VHI7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Ccdc65Q8VHI7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.09■□□□□ 0.97
Ccdc65Q8VHI7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.09■□□□□ 0.97
Ccdc65Q8VHI7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc65Q8VHI7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc65Q8VHI7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc65Q8VHI7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc65Q8VHI7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc65Q8VHI7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.08■□□□□ 0.97
Ccdc65Q8VHI7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc65Q8VHI7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ccdc65Q8VHI7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc65Q8VHI7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc65Q8VHI7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc65Q8VHI7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc65Q8VHI7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc65Q8VHI7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.07■□□□□ 0.96
Ccdc65Q8VHI7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc65Q8VHI7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc65Q8VHI7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc65Q8VHI7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc65Q8VHI7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc65Q8VHI7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc65Q8VHI7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
Ccdc65Q8VHI7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms