Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Cd109Q8R422 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
Cd109Q8R422 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC28.96■■■□□ 2.23
Cd109Q8R422 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Cd109Q8R422 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Cd109Q8R422 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Cd109Q8R422 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC28.96■■■□□ 2.23
Cd109Q8R422 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Cd109Q8R422 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Cd109Q8R422 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
Cd109Q8R422 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Cd109Q8R422 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC28.95■■■□□ 2.22
Cd109Q8R422 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
Cd109Q8R422 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cd109Q8R422 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC28.94■■■□□ 2.22
Cd109Q8R422 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cd109Q8R422 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cd109Q8R422 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Cd109Q8R422 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cd109Q8R422 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Cd109Q8R422 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Cd109Q8R422 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Cd109Q8R422 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Cd109Q8R422 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Cd109Q8R422 Gm37179-201ENSMUST00000194862 823 ntBASIC28.92■■■□□ 2.22
Cd109Q8R422 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Cd109Q8R422 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC28.91■■■□□ 2.22
Cd109Q8R422 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cd109Q8R422 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Cd109Q8R422 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cd109Q8R422 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cd109Q8R422 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cd109Q8R422 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cd109Q8R422 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC28.91■■■□□ 2.22
Cd109Q8R422 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
Cd109Q8R422 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cd109Q8R422 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cd109Q8R422 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cd109Q8R422 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Cd109Q8R422 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cd109Q8R422 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cd109Q8R422 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC28.89■■■□□ 2.21
Cd109Q8R422 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Cd109Q8R422 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
Cd109Q8R422 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Cd109Q8R422 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cd109Q8R422 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
Cd109Q8R422 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cd109Q8R422 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC28.88■■■□□ 2.21
Cd109Q8R422 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cd109Q8R422 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cd109Q8R422 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.87■■■□□ 2.21
Cd109Q8R422 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cd109Q8R422 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC28.87■■■□□ 2.21
Cd109Q8R422 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cd109Q8R422 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Cd109Q8R422 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Cd109Q8R422 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Cd109Q8R422 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Cd109Q8R422 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC28.85■■■□□ 2.21
Cd109Q8R422 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cd109Q8R422 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Cd109Q8R422 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cd109Q8R422 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cd109Q8R422 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC28.85■■■□□ 2.21
Cd109Q8R422 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC28.85■■■□□ 2.21
Cd109Q8R422 Gm18671-201ENSMUST00000214826 683 ntBASIC28.85■■■□□ 2.21
Cd109Q8R422 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC28.85■■■□□ 2.21
Cd109Q8R422 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
Cd109Q8R422 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Cd109Q8R422 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
Cd109Q8R422 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cd109Q8R422 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC28.84■■■□□ 2.21
Cd109Q8R422 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC28.84■■■□□ 2.21
Cd109Q8R422 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Cd109Q8R422 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Cd109Q8R422 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cd109Q8R422 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cd109Q8R422 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC28.83■■■□□ 2.21
Cd109Q8R422 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC28.83■■■□□ 2.21
Cd109Q8R422 AC137127.1-201ENSMUST00000213466 1078 ntBASIC28.83■■■□□ 2.21
Cd109Q8R422 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cd109Q8R422 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC28.83■■■□□ 2.2
Cd109Q8R422 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Cd109Q8R422 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Cd109Q8R422 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Cd109Q8R422 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cd109Q8R422 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Cd109Q8R422 AV356131-201ENSMUST00000206201 750 ntBASIC28.81■■■□□ 2.2
Cd109Q8R422 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cd109Q8R422 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cd109Q8R422 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
Cd109Q8R422 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cd109Q8R422 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cd109Q8R422 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cd109Q8R422 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Cd109Q8R422 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cd109Q8R422 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cd109Q8R422 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cd109Q8R422 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms