Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Abca8bQ8K440 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Abca8bQ8K440 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Abca8bQ8K440 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC30.52■■■□□ 2.48
Abca8bQ8K440 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Abca8bQ8K440 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Abca8bQ8K440 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Abca8bQ8K440 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Abca8bQ8K440 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Abca8bQ8K440 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Abca8bQ8K440 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Abca8bQ8K440 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Abca8bQ8K440 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Abca8bQ8K440 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
Abca8bQ8K440 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC30.5■■■□□ 2.47
Abca8bQ8K440 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Abca8bQ8K440 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Abca8bQ8K440 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC30.5■■■□□ 2.47
Abca8bQ8K440 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC30.5■■■□□ 2.47
Abca8bQ8K440 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC30.5■■■□□ 2.47
Abca8bQ8K440 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Abca8bQ8K440 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Abca8bQ8K440 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
Abca8bQ8K440 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Abca8bQ8K440 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Abca8bQ8K440 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Abca8bQ8K440 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC30.48■■■□□ 2.47
Abca8bQ8K440 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Abca8bQ8K440 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC30.48■■■□□ 2.47
Abca8bQ8K440 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Abca8bQ8K440 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Abca8bQ8K440 Gm13148-201ENSMUST00000118892 745 ntBASIC30.47■■■□□ 2.47
Abca8bQ8K440 Mir5133-201ENSMUST00000174955 77 ntBASIC30.47■■■□□ 2.47
Abca8bQ8K440 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Abca8bQ8K440 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Abca8bQ8K440 AC153962.1-201ENSMUST00000218530 1948 ntBASIC30.47■■■□□ 2.47
Abca8bQ8K440 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Abca8bQ8K440 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC30.47■■■□□ 2.47
Abca8bQ8K440 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC30.47■■■□□ 2.47
Abca8bQ8K440 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Abca8bQ8K440 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Abca8bQ8K440 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
Abca8bQ8K440 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Abca8bQ8K440 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Abca8bQ8K440 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Abca8bQ8K440 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Abca8bQ8K440 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC30.45■■■□□ 2.47
Abca8bQ8K440 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Abca8bQ8K440 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Abca8bQ8K440 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Abca8bQ8K440 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Abca8bQ8K440 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
Abca8bQ8K440 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Abca8bQ8K440 Gm7514-201ENSMUST00000209475 934 ntBASIC30.44■■■□□ 2.46
Abca8bQ8K440 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Abca8bQ8K440 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Abca8bQ8K440 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Abca8bQ8K440 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Abca8bQ8K440 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Abca8bQ8K440 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Abca8bQ8K440 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Abca8bQ8K440 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
Abca8bQ8K440 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Abca8bQ8K440 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Abca8bQ8K440 Gm12527-201ENSMUST00000117967 564 ntBASIC30.43■■■□□ 2.46
Abca8bQ8K440 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Abca8bQ8K440 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Abca8bQ8K440 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Abca8bQ8K440 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Abca8bQ8K440 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Abca8bQ8K440 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Abca8bQ8K440 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Abca8bQ8K440 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC30.4■■■□□ 2.46
Abca8bQ8K440 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Abca8bQ8K440 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Abca8bQ8K440 Gm43859-201ENSMUST00000200075 1412 ntBASIC30.4■■■□□ 2.46
Abca8bQ8K440 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Abca8bQ8K440 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Abca8bQ8K440 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC30.38■■■□□ 2.45
Abca8bQ8K440 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Abca8bQ8K440 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Abca8bQ8K440 Gm20760-201ENSMUST00000179197 648 ntBASIC30.37■■■□□ 2.45
Abca8bQ8K440 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Abca8bQ8K440 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC30.37■■■□□ 2.45
Abca8bQ8K440 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC30.36■■■□□ 2.45
Abca8bQ8K440 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Abca8bQ8K440 Gm10252-201ENSMUST00000209541 832 ntBASIC30.36■■■□□ 2.45
Abca8bQ8K440 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Abca8bQ8K440 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC30.35■■■□□ 2.45
Abca8bQ8K440 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Abca8bQ8K440 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Abca8bQ8K440 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Abca8bQ8K440 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Abca8bQ8K440 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
Abca8bQ8K440 Mir6236-201ENSMUST00000184437 123 ntBASIC30.34■■■□□ 2.45
Abca8bQ8K440 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Abca8bQ8K440 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Abca8bQ8K440 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Abca8bQ8K440 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Abca8bQ8K440 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 177.1 ms