Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Shtn1Q8K2Q9 Gm11421-201ENSMUST00000122124 294 ntBASIC23.83■■□□□ 1.41
Shtn1Q8K2Q9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.83■■□□□ 1.41
Shtn1Q8K2Q9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Shtn1Q8K2Q9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shtn1Q8K2Q9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Shtn1Q8K2Q9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Shtn1Q8K2Q9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Shtn1Q8K2Q9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shtn1Q8K2Q9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shtn1Q8K2Q9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shtn1Q8K2Q9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shtn1Q8K2Q9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Shtn1Q8K2Q9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.81■■□□□ 1.4
Shtn1Q8K2Q9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.81■■□□□ 1.4
Shtn1Q8K2Q9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.81■■□□□ 1.4
Shtn1Q8K2Q9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shtn1Q8K2Q9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shtn1Q8K2Q9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shtn1Q8K2Q9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Shtn1Q8K2Q9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shtn1Q8K2Q9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shtn1Q8K2Q9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Shtn1Q8K2Q9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.79■■□□□ 1.4
Shtn1Q8K2Q9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shtn1Q8K2Q9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Shtn1Q8K2Q9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Shtn1Q8K2Q9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shtn1Q8K2Q9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shtn1Q8K2Q9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shtn1Q8K2Q9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.78■■□□□ 1.4
Shtn1Q8K2Q9 Gm9988-201ENSMUST00000069786 435 ntBASIC23.78■■□□□ 1.4
Shtn1Q8K2Q9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shtn1Q8K2Q9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shtn1Q8K2Q9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shtn1Q8K2Q9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shtn1Q8K2Q9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shtn1Q8K2Q9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Shtn1Q8K2Q9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Shtn1Q8K2Q9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shtn1Q8K2Q9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
Shtn1Q8K2Q9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shtn1Q8K2Q9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shtn1Q8K2Q9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shtn1Q8K2Q9 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.76■■□□□ 1.39
Shtn1Q8K2Q9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Shtn1Q8K2Q9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.75■■□□□ 1.39
Shtn1Q8K2Q9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Shtn1Q8K2Q9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shtn1Q8K2Q9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shtn1Q8K2Q9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Shtn1Q8K2Q9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Shtn1Q8K2Q9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shtn1Q8K2Q9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shtn1Q8K2Q9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shtn1Q8K2Q9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Shtn1Q8K2Q9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shtn1Q8K2Q9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Reep4-203ENSMUST00000226563 1444 ntBASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.72■■□□□ 1.39
Shtn1Q8K2Q9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shtn1Q8K2Q9 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms