Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.12■□□□□ 0.97
Fam228aQ8CDW1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Fam228aQ8CDW1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.12■□□□□ 0.97
Fam228aQ8CDW1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fam228aQ8CDW1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fam228aQ8CDW1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fam228aQ8CDW1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fam228aQ8CDW1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fam228aQ8CDW1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fam228aQ8CDW1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Fam228aQ8CDW1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fam228aQ8CDW1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Fam228aQ8CDW1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fam228aQ8CDW1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam228aQ8CDW1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam228aQ8CDW1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.09■□□□□ 0.97
Fam228aQ8CDW1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Fam228aQ8CDW1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam228aQ8CDW1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Fam228aQ8CDW1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fam228aQ8CDW1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Fam228aQ8CDW1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Fam228aQ8CDW1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Fam228aQ8CDW1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Fam228aQ8CDW1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Fam228aQ8CDW1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Fam228aQ8CDW1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Fam228aQ8CDW1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Fam228aQ8CDW1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam228aQ8CDW1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam228aQ8CDW1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fam228aQ8CDW1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.06■□□□□ 0.96
Fam228aQ8CDW1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Fam228aQ8CDW1 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.06■□□□□ 0.96
Fam228aQ8CDW1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Fam228aQ8CDW1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Fam228aQ8CDW1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam228aQ8CDW1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam228aQ8CDW1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Fam228aQ8CDW1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.05■□□□□ 0.96
Fam228aQ8CDW1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam228aQ8CDW1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam228aQ8CDW1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.05■□□□□ 0.96
Fam228aQ8CDW1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Fam228aQ8CDW1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam228aQ8CDW1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam228aQ8CDW1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Fam228aQ8CDW1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Fam228aQ8CDW1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam228aQ8CDW1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam228aQ8CDW1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam228aQ8CDW1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam228aQ8CDW1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Fam228aQ8CDW1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam228aQ8CDW1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam228aQ8CDW1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam228aQ8CDW1 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.03■□□□□ 0.96
Fam228aQ8CDW1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.02■□□□□ 0.96
Fam228aQ8CDW1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Fam228aQ8CDW1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.02■□□□□ 0.96
Fam228aQ8CDW1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam228aQ8CDW1 Mir6538-201ENSMUST00000183713 110 ntBASIC21.02■□□□□ 0.96
Fam228aQ8CDW1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Fam228aQ8CDW1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam228aQ8CDW1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam228aQ8CDW1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.02■□□□□ 0.96
Fam228aQ8CDW1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Fam228aQ8CDW1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam228aQ8CDW1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Fam228aQ8CDW1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam228aQ8CDW1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fam228aQ8CDW1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam228aQ8CDW1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam228aQ8CDW1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam228aQ8CDW1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam228aQ8CDW1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms